| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5999 |
|---|
| Symbol | |
|---|
| ID | 6279276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 2227181 |
|---|
| End bp | 2228926 |
|---|
| Gene Length | 1746 bp |
|---|
| Protein Length | 581 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642617060 |
|---|
| Product | phosphoenolpyruvate phosphomutase |
|---|
| Protein accession | YP_001889703 |
|---|
| Protein GI | 187920671 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1213] Predicted sugar nucleotidyltransferases
[COG2513] PEP phosphonomutase and related enzymes |
|---|
| TIGRFAM ID | [TIGR02320] phosphoenolpyruvate phosphomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.297646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCC GCGAACCCGC TTTCGTCTCC GCTTCCCGTA GCGCGCGCCT GCGCCAGATG
CTCGTCAGCA ACGAACTCGA ATTCATGATG GAGGCCCATA ACGGCCTGTC CGCCCGCATC
GTCCGCGAAG CCGGCTTCAA GGCCATCTGG GGTTCGGGCC TTGCAATCTC CGCGCAATAC
GGCGTGCGCG ACAACAATGA AGCAAGCTGG ACGCAAGTGG TCGACACGCT CGAATTCATG
GCCGACGCCA GCGATCTGCC GATCCTGCTT GACGGCGATA CCGGCTACGG CAACTTCAAC
AATGTGCGCC GCCTCGTGCG CAAACTCGAA CAGCGCGGCA TTGCCGGCGT GTGTATCGAA
GACAAGCAGT TCCCCAAGAC CAACAGCTTC ATCAACGGCG AAGCGCAACC GCTCGCCGAT
ATGGACGAGT TCTGCGGCAA GATCAAGGCC GGCAAAGACT CGCAGTCCGA CGAGAACTTT
TCGATCGTCG CGCGGGTTGA AGCGTTGATC GCCGGCTGGG GCATGGACGA AGCGCTGCGT
CGCGCGGAAG CGTATCGCCA GGCGGGCGCG GACGCGATCC TGATTCACAG CAAGCTGTCG
CGTCCCGACG AAATTCTCGA GTTCGCGCGC GAATGGGCCG GCCGCGGCCC GCTCGTGATC
GTGCCGACCA AGTACTACAG CACGCCGACC GAAGTGTTCC GCGAGGCCGG CATCAGCACG
GTGATCTGGG CGAACCATCT GATCCGCGCG GCGACTTCGG CGATGCAAGC CGTCGCCAAG
GAAATCCACA CGAGCGAAAC GCTCGTCAAT GTGGAAGACA GCATTGCCGC CGTCAACGAA
ATTTTCCGCC TGCAAGACGC CGACGAATAC TCGGAAGCGG AAGACCGTTA TCTGTCGAGC
GGTCGTGCAG CCGGTGCCGC GGTCGTGCTC GCGGCAAGTC GCGGCAAGGG CCTCGAAGCC
GTCACAGAAG ACCGTCCGAA AGTGATGCTG CCGATCGCCG GCAAGCCGCT GCTGCGCTGG
CTCGTCGATG CGTTCAAGAA GCAGGGCGTG AACGACATTA CCGTGGTCGG CGGCTATCGC
GCGGATGCGA TCGACACGGC CGGCATCAAG CTCGTCGTCA ACGAACAGCA TGCGCAAACC
GGTGAACTCG CGTCGCTCGC CTGCGCGATC GACAAGCTGG CCGGCGACAC GGTGGTGTCG
TATGGCGACC TGCTGTTCCG CAGCTACATC CTGCGCGATC TGGTGGAGAG CGAAGCGGCG
TTCAGCGTGG TGGTCGATTC GTCGTTGACC GACGCGGAAA ACGCCAGCGT GCGTGACTTC
GCCTGGTGTT CGGCCGCCGA CGACCGTGGT TTGTTCGGCA ATAAGGTCCT GCTGCGTCAT
GTGTCGAGCG GGCAGGATGC ATCCTCGGCA ATCGCGTCGC AAACACCGCA TGGCCGCTGG
GTCGGTTTGC TGAACGTGCG CGGTGAAGGC CGTGGACGTT TGCAGGCTGT GATGAAGCAG
TTGCAGGCGC GCGCGGATTT CGCGTCGCTC GATATGCCCG CGTTGCTGAA TGCGCTGATC
GAAGCAGGCG AATCGATCGA AGTGCAGTAC GTGCACGGCC ACTGGCGCGG CGTGAACGAC
CTGGAAGACT TCCGTCGCGC GGGTGACTTC GCGCATGCCC AAGCGCCGTT CGCGGCCGCT
GTGGGTGCGG CGGAGAAAGG GACGGCAAAC GGCGCGACGA ACGCAGCCAG CGGAGCCGCG
CAATGA
|
|---|
| Protein sequence | MNAREPAFVS ASRSARLRQM LVSNELEFMM EAHNGLSARI VREAGFKAIW GSGLAISAQY
GVRDNNEASW TQVVDTLEFM ADASDLPILL DGDTGYGNFN NVRRLVRKLE QRGIAGVCIE
DKQFPKTNSF INGEAQPLAD MDEFCGKIKA GKDSQSDENF SIVARVEALI AGWGMDEALR
RAEAYRQAGA DAILIHSKLS RPDEILEFAR EWAGRGPLVI VPTKYYSTPT EVFREAGIST
VIWANHLIRA ATSAMQAVAK EIHTSETLVN VEDSIAAVNE IFRLQDADEY SEAEDRYLSS
GRAAGAAVVL AASRGKGLEA VTEDRPKVML PIAGKPLLRW LVDAFKKQGV NDITVVGGYR
ADAIDTAGIK LVVNEQHAQT GELASLACAI DKLAGDTVVS YGDLLFRSYI LRDLVESEAA
FSVVVDSSLT DAENASVRDF AWCSAADDRG LFGNKVLLRH VSSGQDASSA IASQTPHGRW
VGLLNVRGEG RGRLQAVMKQ LQARADFASL DMPALLNALI EAGESIEVQY VHGHWRGVND
LEDFRRAGDF AHAQAPFAAA VGAAEKGTAN GATNAASGAA Q
|
|---|
| |