Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5905 |
Symbol | |
ID | 6277439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 2125129 |
End bp | 2126526 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642616968 |
Product | aminotransferase class-III |
Protein accession | YP_001889611 |
Protein GI | 187920579 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA CCACGTCGCA GCCGGCTGCA CAAATCGAGG CCGCCGGTAG CAGCAAATCC CACGACGCAC TGCGCGGCGA CATGCCGAAC GGCTTCGATC CGGCGTCGCT CGATCACCTC GACGCCGGCA CGCAACGGCA CATTGCGCGC CGCTTACGGC TGCTCAGTCC GTCGTATCGA TTGTTCTACG CCGAGCCCGT CAAGATCGTG CGCGGCGAGA AGGTCTATCT GTACGACGAC CAGGGCAACG ACTATCTCGA TGCCTACAAC AACGTCGTCT GCGTCGGACA TGCCAATCCG CGCATCGTCG ATGCCGTCAC CCGCCAGCTC TCGACGCTCT GCACGCATAC CCGTTACATG CAGGAGCCGA TCCTCGACTA CGCCGAGGAC CTGCTCTCGA CGTTCAACAC GTCGATCCGC GCGGGCCAGA TGATGTTCAC CTGCACCGGC TCCGAGGCCA ACGACCTGGC CACGCGCATC GCGATGCAGT ACGCCGGCAA GACCGGCGTG ATCGTGACCA GTGAGGCCTA TCACGGCAAC TCGCATCTCA CCTCGAGCTT TTCGCCCTCG CTGGGCCGCA GGGCTTTGCT GGGCCCCTAT GTGCGCACGG TGCCGGCTCC CGACTCGTAC AGAATGACGC CGTCGGAGAT CGGTCAGCGC ATGGCCGCAC AGGTTGCGTT GCAGATCGAG GACATCCGCC GTCATGGCGG CGGTCTGGCG GCGTTCATCG CCGATTCGTT CTTCTCGTCG GATGGCGTAT TCGCCCACCC GACCGATGTA CTCGCACCGG TAGCCGAGGT GGTGCGCCGC GCCGGCGGGC TGTTCATCGC GGACGAGGTG CAGTCCGGCT TCGGGCGCAG CGGCACGCAT ATGTGGGGGC ATGAGCGCCA TGGCGTCGTG CCCGACATCG TCACGCTCGG CAAACCGATG GGCAACGGCT ATCCGGTGGC GGGCCTGGTC GTGCGTCCCG AGGTCGTCGC GGGCTTCGGG CAGGACATGC GCTACTTCAA CACCTTCGGC GGCAATTCGG TCGCGATCGC GGCCGCGCAG GCCACGCTCG ACGTGTTGCG CGACGAGCAC GTGCTCGACA ACGCGCAGCG GGTCGGCGCG ATCCTGGCCG AGGGCTTGAA CGCATTGGCA AGGAAATACG AATGCATCGG CGACGTGCGC GGCACGGGCC TGTATTTCGG CGTCGAGATC GTGCGTGACC GCGCGAAGAA GGACACGGAC ATCGCGACGG CGCTCAAGAT CGTCAACGGC TTGCGCCAGC GGCGCGTGCT GATTTCCGCG ACCGGGCCGG ACGCGAGTGT GCTGAAGATA CGCCCGCCGC TGGTCTTTGG CGCTAACGAT GCCGACCGCC TGTTGACGGA GTTGGATACG GTGCTTGCCG CACTGTGA
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Protein sequence | MNTTTSQPAA QIEAAGSSKS HDALRGDMPN GFDPASLDHL DAGTQRHIAR RLRLLSPSYR LFYAEPVKIV RGEKVYLYDD QGNDYLDAYN NVVCVGHANP RIVDAVTRQL STLCTHTRYM QEPILDYAED LLSTFNTSIR AGQMMFTCTG SEANDLATRI AMQYAGKTGV IVTSEAYHGN SHLTSSFSPS LGRRALLGPY VRTVPAPDSY RMTPSEIGQR MAAQVALQIE DIRRHGGGLA AFIADSFFSS DGVFAHPTDV LAPVAEVVRR AGGLFIADEV QSGFGRSGTH MWGHERHGVV PDIVTLGKPM GNGYPVAGLV VRPEVVAGFG QDMRYFNTFG GNSVAIAAAQ ATLDVLRDEH VLDNAQRVGA ILAEGLNALA RKYECIGDVR GTGLYFGVEI VRDRAKKDTD IATALKIVNG LRQRRVLISA TGPDASVLKI RPPLVFGAND ADRLLTELDT VLAAL
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