| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5585 |
|---|
| Symbol | |
|---|
| ID | 6278965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | + |
|---|
| Start bp | 1784916 |
|---|
| End bp | 1785947 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642616663 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001889306 |
|---|
| Protein GI | 187920275 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.582272 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCACTC TTTCCCAACC GACCGCCTGG TCCGTCGACG AACGGCAACT CGACCCGACA
GCCGGCATCA ACGAAAAACT GCGCTTTGCG CTGCGTTATG CGGTGTTGGC CCCGTCGAAC
CACAACACAC AGCCGTGGCA TTTCATCGTC GACGGCGATA GCGTGACGCT TTGCGCCGAC
CGCACACGGG CGCTGCCGGT GGTCGATCCC TTCGACCGCG AGCTGCTCAT CAGTTGCGGC
GCGGCGCTCT TCAATCTGCG CGTGGCGCTG AGCCGCTTTG GGCTTGCCTA TGCCATCACG
CTGCTGCCGT CGACCGTCGA CGTCGACGTG CTCGCACATC TGCGCGTCAT ACGCGACGGC
CGCTGCGATA CCGAGCTCGC CTCGCTGTTC GAGGCGATTC CCCTGCGCGT GACGACACGC
GAGACTTTCG CCGACGAGCC CTCCCCGCCC GGCTTCCGGC AGCGGCTTGA GGAAGCCGGC
GCGATCGAGG GCTGCGACAC GGTTTGCGTT GAGAACATCG CGGGCCGGGA ACAGCTCGCC
GATCTGATCG GCGAAGCCGA CCAGGCGCAG TTCAAAGATG CGCGCTTTCG TCGGGAACTC
GCAAGCTGGA TTCATCCGCG GCGTCATCAG GACGGCATGC CCGCGTTGTC GCCAGGGGTG
CGCGCGCTGC TCGACTTCGC CGCGCCGCTG GTCAGTTCGG TAGTTCGCAC GTTCGATCAG
GGCGGCGGCC TGGCCGCAAC GCATCATACG CTCGCCATAG GCTCGCCCCT GCTGATGTGC
ATCGCGACCG GCACCGATGA CGCGTCCGCG TGGCTCTCAG CAGGCCAGGC GCTCGAACGC
GTGCTGCTGA CCGCGGCCGC CGAAGGCATG ACTGCGTCGT ACCTGAATCA ACCAATCGAA
ATCGCTTCGC TGCGCGAGCG CCTGTGTGCC GCGCTGAAAC TGGACGCCGT GCCGCAGTTG
CTGATCCGCA TCGGCCGTGG CGCCCAGGTG CCGCATTCGC CGCGGCGGCC GCTTGAAGAG
GTAGTGTCGT AG
|
|---|
| Protein sequence | MATLSQPTAW SVDERQLDPT AGINEKLRFA LRYAVLAPSN HNTQPWHFIV DGDSVTLCAD
RTRALPVVDP FDRELLISCG AALFNLRVAL SRFGLAYAIT LLPSTVDVDV LAHLRVIRDG
RCDTELASLF EAIPLRVTTR ETFADEPSPP GFRQRLEEAG AIEGCDTVCV ENIAGREQLA
DLIGEADQAQ FKDARFRREL ASWIHPRRHQ DGMPALSPGV RALLDFAAPL VSSVVRTFDQ
GGGLAATHHT LAIGSPLLMC IATGTDDASA WLSAGQALER VLLTAAAEGM TASYLNQPIE
IASLRERLCA ALKLDAVPQL LIRIGRGAQV PHSPRRPLEE VVS
|
|---|
| |