Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5409 |
Symbol | |
ID | 6278208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1601994 |
End bp | 1602881 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642616494 |
Product | Procollagen-proline dioxygenase |
Protein accession | YP_001889137 |
Protein GI | 187920106 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.23734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.673312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTAG TGGATGCCGC ATGGGAAGAG TGGCTGAGCA GCAACGTGGC GCGCGGCTGT AGTCCCGATT CGATGGTCGA CGCCATGGTG CAAGCCGGTT TTGCCACCGA CGCCGCGCGC GCAGCCGTGC ACAGCACTTT CGGGCAAGAC CCGGCTAAAG CGGCAAATCC GGCCTTTGCC GCGGCGGCCG CGACCGAAGC GGCGCTCGCC AAAGCCGCGC CGCAAATCTA CCAATACGAC GATCCGCCCG TCGCGCGCGG CAACGTGATC CGCGCGCACG ATCGCGACGT GCGTGTGCTG GTGCGTTGCG AGCGTCCCCA GGTGATCGTG TTCGGCGACG TGTTGTCTCC GGACGAATGC GCCGAGATGA TCGAGCGTTC GCGTCATCGG CTGAAGCGCT CCACCACGGT CAATCCGGAG ACCGGCAAGG AAGACGTGAT CCGCAATCGC ACCAGCGAAG GCATCTGGTA TCAGCGCGGC GAAGATGCCT TCATCGAACG GATGGATCGG CGCATTTCGA GCCTGATGAA CTGGCCGGTC GAAAACGGCG AAGGGCTGCA GATTCTGCAC TACGGCACGA CCGGCGAATA CCGCCCGCAT TTCGACTATT TCCCGCCTGA TCAACCCGGC AGCGCGGTGC ACACCGCGCA GGGCGGCCAG CGCGTCGCTA CGTTGGTGAT CTACCTGAAC GATGTGCCGG ACGGCGGCGA AACCATCTTC CCCGAAGCGG GCATATCGGT CGCGGCGAGA CAGGGTGGGG CGGTGTATTT CCGTTATATG AACGGCCAGC GCCAACTCGA TCCACTGACC TTGCACGGCG GTGCGCCGGT ACTCGGCGGC GACAAATGGA TCATGACGAA GTGGATGCGC GAACGCGCTT ACGGCTGA
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Protein sequence | MPVVDAAWEE WLSSNVARGC SPDSMVDAMV QAGFATDAAR AAVHSTFGQD PAKAANPAFA AAAATEAALA KAAPQIYQYD DPPVARGNVI RAHDRDVRVL VRCERPQVIV FGDVLSPDEC AEMIERSRHR LKRSTTVNPE TGKEDVIRNR TSEGIWYQRG EDAFIERMDR RISSLMNWPV ENGEGLQILH YGTTGEYRPH FDYFPPDQPG SAVHTAQGGQ RVATLVIYLN DVPDGGETIF PEAGISVAAR QGGAVYFRYM NGQRQLDPLT LHGGAPVLGG DKWIMTKWMR ERAYG
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