| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5376 |
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| Symbol | |
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| ID | 6279719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1560807 |
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| End bp | 1563431 |
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| Gene Length | 2625 bp |
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| Protein Length | 874 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642616462 |
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| Product | SMC domain protein |
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| Protein accession | YP_001889105 |
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| Protein GI | 187920074 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.558222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.369083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTGC AAAGCATTGC GATTCAGGAG TTCAAGCAGT TCACCGGCAA GCTCGTCATC
GACGATCTGC AGCCCGGTCT TAATCTTTTC GTCGGTCCGA ACGAGGCCGG TAAGAGCACG
ATTGCCGAAG CCGTACGCGC CGTGTTTCTG GAGCGCTACA AGGCCTCGCA TCTGAAAGAC
CTGTTGCCGT GGGGCAAGGC GAGCGGGCAG CCGTCGGTCG AAGTGAGCTT CGAACTGGAC
GGCATGGCGT GCCGCTTGTC GAAGCAGTTC GTCACGCGGC AGCGCTGTGA GCTGAGGATC
GGCCAGAGCG CGTTTGGTGA AGATGAAGCC GAAGACAAGC TCGCAGCCTT GCTCGGCTTT
TCACGTCCCG CGCGTGGGCC GTTGAAGGCG GAGAACGCGG GCGTACCTGG TTTGTTGTGG
GTGCAGCAAG GCGGCACGCA GGAGATGCGC GATTCCACCG GCCACGCGGC GCAGTATCTG
CGCGATGCGC TGTCGCAGCT CTCGGGCGGC CGCGAATCGG CGGGTGAGGA TGCGTTGATC
GCCGCCGTGC AGCGCGAACT TCGGCAACTG CTGACCGCGC GCACGCAGAA GTCGACCGGA
CCGCTCGCCG AGGCCGAACA GACCCTCACG CGCCTGATCG AGGAGCGCGC CGATCTTGAA
CAGCAGCGTC AACAGTTCGA GGCGAACATT GCCAGTCTCG CCACGCAGCA GCAAACCTTC
GACGATACGC AGCGCAAACG CCCGTGGGAA ATTCACGAGC AGAAAGCCGT GCAGGCGCAA
TTGCGCGCCG ACGCCGTCGT GCAACTCGAA GGCAGCCTCA AAGGACTTGA GCAGTCGCTG
AAAGCGAGCG AAGCCGAACT GGCTTTGCCG CTGCAGCAGG AGCAGAACGC GCTCGACCTG
GAAGCGGCCG TCGCGCGCGA GCGCCTGCAA CTCGACGCGC TGCGTGCGAG CGTCGCGGCG
GTCCAGGCCG AACACGCGGA TGCCGCGGCC AGCGTGACGC AATTCGAGCA GGCTTTCGCC
GATGCCAACC GCGCACTCGA ACTGGCCAAT GCGGCCGTGA CGGCAGCCGA TCTGCGCAGC
CAGATCGGAC TATTTCGCGC GGAAAGCGAG CGGCTCGAAG CGTCGATTGC CGCCGCCAGC
AAGGCTAACG AAGCCGTGCT CGAAGCCGCG CGCGAAGCGG CCACGCTCGA AATCGACGAG
GCTAAGCTCA AGCGGCTCGC CGCGCTCGGC AGTGAGCTGA GTGTGTTGCG TGCTCGCACT
GAAGCAGCGA TGACCCGCAT CGAATATCGC CTGAACGGCG CGATTACCGT CGACGAAAAA
CCGGTGAGCG GCGAAGGCGT CCTGCGTGTG GACGAGGAGA AACGGATCGG CCTCGGCGCG
CTCGGTGAAT TGCGGGTGAT TCCGGGTGTC TCGGATCTGC CGGCGCGTTT GTCCGAACTC
GCGTCGCTCG AAGCCCAGCA TGCGCAATTG TTGCAGGCGC TCGGCGTCGC GTCGCTCGGC
GAGGGCGAAG CGCGGCACGA GCGTTGGAAG GCGGCGCTCG CGCAGCAGAA AAGCCAGGCA
AAGATTCTCG ACGTGCACGC ACCGCAGGGC ATCGACGCGC TGCGCGCAGC GTCGGCGACG
GCTGCGGCGC GCATGCAGGC CGCCAACGAG CGGCTCGCGG GTTTGCCCGA CGTTTCCGCT
GCGCCGCCGC TCGACGAAGC GCGCCGCAAC GCGGAGATCG CGCGCGACGC GTTGGAAGCC
GCACGAAAAG TGCTAACGCA GGCGGCCGAC AAAAAATCGA CCGGCATGGC GAACGCGGAA
TCGCTCGCTG ATCAATTGCA GCGCAAGCAG GCGCAACTGG ACGACGAAGC GTTCCGTCGC
AACCGCGCGC AGTGGCAGGC GAAGATCGTC GAACAACGCG TGCAGGTCGA GGCCTTGCGC
AAGCAGCGCG AAGGGCGCGA GCGCGAACTG GAAGCAGCAC GTCTCGACGA CCCGGAGGCT
GAGGCGAAGC GCTATCGCGC GTCGGCGGAA CTCGCGCGCG GCGAGCAGAA CGAGCGGCAG
GTGAAGATCG CGGCGTTGCG TGGTCAACTG GAGACGGCCG GCGCCTCGGG TCTCGGCGAG
CGTCTGGCGG CGGTGCAGGC CAAGGTCGAA CAGGCCACGC GGCGCAAGGA CGAACTCAGC
TTGCGCGCGA GCGCGTTGAG TTTGCTCGAC GAGGTGCTGG TCGACGAACG CGACGCCGCG
GTCGCGCAAC TGCGCGCGCC ATTGACCGAG CGCCTCGGGC ATTATCTGAA GCGGATTTTC
CCGCAATCCA CGATCGCGCT CGGTGACGAT CTGAGTCCCG CGACGTTGGA CCGCTTTGGC
CGCGCGGACA CGCTCGAGGC GCTGAGCTTC GGCACACGCG AACAACTCGG CATTCTGACG
CGGCTCGCTT ACGCGGATCT GTTGAAGGCA TCAGGCCGGC CGACCTTGCT CATGCTCGAC
GACGCGGCGG TGCATACCGA CGCCGCGAGG CGCGATGCGA TCAAGCGCGC GCTGATCGAC
GCGGCCACGC GCCATCAGAT TCTGGTGTTC ACGTGCCACC CGGAGTTGTG GGACGACCTG
GGCGTCAGGC AGCGGGCGAT CGAGGATTTG AAGGTGGCGG CCTAA
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| Protein sequence | MKLQSIAIQE FKQFTGKLVI DDLQPGLNLF VGPNEAGKST IAEAVRAVFL ERYKASHLKD
LLPWGKASGQ PSVEVSFELD GMACRLSKQF VTRQRCELRI GQSAFGEDEA EDKLAALLGF
SRPARGPLKA ENAGVPGLLW VQQGGTQEMR DSTGHAAQYL RDALSQLSGG RESAGEDALI
AAVQRELRQL LTARTQKSTG PLAEAEQTLT RLIEERADLE QQRQQFEANI ASLATQQQTF
DDTQRKRPWE IHEQKAVQAQ LRADAVVQLE GSLKGLEQSL KASEAELALP LQQEQNALDL
EAAVARERLQ LDALRASVAA VQAEHADAAA SVTQFEQAFA DANRALELAN AAVTAADLRS
QIGLFRAESE RLEASIAAAS KANEAVLEAA REAATLEIDE AKLKRLAALG SELSVLRART
EAAMTRIEYR LNGAITVDEK PVSGEGVLRV DEEKRIGLGA LGELRVIPGV SDLPARLSEL
ASLEAQHAQL LQALGVASLG EGEARHERWK AALAQQKSQA KILDVHAPQG IDALRAASAT
AAARMQAANE RLAGLPDVSA APPLDEARRN AEIARDALEA ARKVLTQAAD KKSTGMANAE
SLADQLQRKQ AQLDDEAFRR NRAQWQAKIV EQRVQVEALR KQREGREREL EAARLDDPEA
EAKRYRASAE LARGEQNERQ VKIAALRGQL ETAGASGLGE RLAAVQAKVE QATRRKDELS
LRASALSLLD EVLVDERDAA VAQLRAPLTE RLGHYLKRIF PQSTIALGDD LSPATLDRFG
RADTLEALSF GTREQLGILT RLAYADLLKA SGRPTLLMLD DAAVHTDAAR RDAIKRALID
AATRHQILVF TCHPELWDDL GVRQRAIEDL KVAA
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