Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5172 |
Symbol | |
ID | 6280422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1338296 |
End bp | 1339696 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642616259 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001888902 |
Protein GI | 187919871 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTCA ACGCAGGGCT ACGGCTCGAT CGTTTGCCGA TGTCGGGATT TCATCGGCGC ATCATGTGGT TGATCGGCAT TGGTATGTTT TTCGACGGCT TCGACATCTA TGTCGCGTCG ACCGTGCTCG GTGCAACGCT CAAAACAGGT TTTTCCACAC TCGGGCAGAA CGCGTTATTC GTATCGCTGA CTTTTGTCGG CATGATGCTC GGCTCGCTCG GCACAGGCTT TCTCGGCGAT CGCTTCGGCC GCCGCTTTAC CTATCAGGCG AATCTCGCGA TCTTCGGCCT CGCATCGCTC GGTGCGGCGC TCGCGCCGAA CATGAGCGTG CTGATTGCGT GCCGCTTCGT GATGGGGCTC GGACTCGGCG CGGAGAACGT GGTCGGCTAT TCGACACTGA CCGAATTCGT CCCGCCGCAA AAACGCGGCA AGCTGCAAGG GCTCATGGCC GTGTTCGTGG TGTCCGGCTT GCCGGTTGCT GGGTTGATCG GCCTGTTGCT GATTCCGGCA TTCGGCTGGC GCGCGATGTT CGTTCTGGGC GGGTTCGGTG CGCTCGGTGT CTGGTATGCA CGCAAGTCGT TGCCGGAGTC GCCGCGCTGG CTCGAATCGG TGGGCCGTCA CGCCGAGGCG GACGCGATCC TGCGACGCAT CGAAAGCGAA ATCACCGACG CGCGCGGCGG TCAACCGCTG CCACCTCTTG CTGCTGGAAA GACCTCCGCA CCGGCCGCTG CATTGATGTC CTTCGGTTCG CTGTTTAGCG GCACGATGCT GCAACGAATG ATTGTCGGCT GCGTCACGCT GGTGGTCATC AATACTCTGC TGTACGGCTT TGTCACCTGG CTGCCGACGT TCTTCGTGCA TCAGGGCTTC AGCATCGCAA AGTCGTTCGG CTTCGCGCTC GTCATGTCGA TCGGCGCGCC GATCGGTTCC GCCATCGGCG CGTTGACGGC GGACTCGTGG GGTCGCAAAC CGACCATCAT CGGCGCGTCG TTCGCGGCCA TCGTGTTCGG CGCGATCTAT CCGTTCGTTT CGAATCCGCT GCTGCTGCCC CTCATCGGCC TGTTGCTGAC CATTCCGATC TACGTGCTGG TGGCGCTCCT GTTCGCAGTC TATGTCCCTG AGCTTTTCCC GACCGAAGTC CGGCTGCGCG CCTCGGGAAT CTGCAACACG TTGGGACGTG GTGCGACGAT CGTCACGCCG TTCATCGTGG TCGCTCTGTA TGCGCAGCAC GGCATTGTCG GCGTACTGGC GTTGATGATC GGTTTGCTTG CGATCCAGAT CGTCGTCGTG GCGTGGCTCG GCGTGGAGCC GACCGGCCAG CGTCTCGAGG ATCTGCAACC CGCCGACTTA CACACACACG ATGCACTGCA CGCCGACGCG CACGCATCGT CCCTCAAGTG A
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Protein sequence | MNVNAGLRLD RLPMSGFHRR IMWLIGIGMF FDGFDIYVAS TVLGATLKTG FSTLGQNALF VSLTFVGMML GSLGTGFLGD RFGRRFTYQA NLAIFGLASL GAALAPNMSV LIACRFVMGL GLGAENVVGY STLTEFVPPQ KRGKLQGLMA VFVVSGLPVA GLIGLLLIPA FGWRAMFVLG GFGALGVWYA RKSLPESPRW LESVGRHAEA DAILRRIESE ITDARGGQPL PPLAAGKTSA PAAALMSFGS LFSGTMLQRM IVGCVTLVVI NTLLYGFVTW LPTFFVHQGF SIAKSFGFAL VMSIGAPIGS AIGALTADSW GRKPTIIGAS FAAIVFGAIY PFVSNPLLLP LIGLLLTIPI YVLVALLFAV YVPELFPTEV RLRASGICNT LGRGATIVTP FIVVALYAQH GIVGVLALMI GLLAIQIVVV AWLGVEPTGQ RLEDLQPADL HTHDALHADA HASSLK
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