| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5159 |
|---|
| Symbol | |
|---|
| ID | 6279584 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 1323788 |
|---|
| End bp | 1324684 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642616246 |
|---|
| Product | 2-dehydropantoate 2-reductase |
|---|
| Protein accession | YP_001888889 |
|---|
| Protein GI | 187919858 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1893] Ketopantoate reductase |
|---|
| TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCT CTGAAAATCC AAGCGTCGCC GTCGTTGGTC CGGGGGCAAT CGGCACGACC
GTGGCGGCAG CGCTCCATGA GGCCGGACGC ACACCGACGG TTTGCGGACG CACGGCGCAC
GAGCGCCTCG AACTGCGCTT CGACGGCGGC CGTATCGTTG TACCGGGTCC GGCGCAGACC
GATCCGGCGG AGATCAAAAA TACCTTCGAC CTTGTTCTCG TTGCAGTCAA GTCGACACAG
GTGAAAGCGG CGGCCCCGTG GTTTTCTGCA CTATGCAGTC ACAAGACGGT CGTTTGCATG
CTGCAAAACG GTGTCGACCA GAAAGCGCTC GTCGCGCCAT ATCTGTCCGG CAACCCGGTG
CTGCCTTCGG TGGTATGGTT TCCCGCTCAA CGCGATCCGG ACGCCTCGGT GTGGCTGCGC
GGCAAACCGC GCCTCACGCT GCCGGACACG CCGGGAATCG CCGTCGTGTT GGCGGCGCTG
CGCGGCACAC GAGTTTCGGT CGACATAGCG GCGGATTTCA CGTCCGTGGC ATGGCGGAAG
CTTCTACAGA ACGCTGTCGC GGGTTTAATG GTTCTGACAG GTCGCCGCGC GGGTATGTTT
TCCCGAACCG ATATCACCAC GCTGTCTCTG GCCTATCTAC GTGAATGTCT TGAGGTTGCC
CGCGCGGAGG GTGCGACGTT GGGCGACGAG GTCCCGCAAG AGATCGTCGA TGGATTTCGT
GACTCCCCGC CCGACCTGGG TACGTCCATC CTCGCCGACC GCCTAGGTGG ACGTCCTCTC
GAATGGGAGA GCCGGAATGG GGTCGTGCAG CAGCGCGGTC GATTGCACGG CATTCCCACA
CCGATCAGCG ATCTTGTCGT GCCACTTCTG GCGGCCGCGA GCGACGGACC GGGCTAG
|
|---|
| Protein sequence | MTISENPSVA VVGPGAIGTT VAAALHEAGR TPTVCGRTAH ERLELRFDGG RIVVPGPAQT
DPAEIKNTFD LVLVAVKSTQ VKAAAPWFSA LCSHKTVVCM LQNGVDQKAL VAPYLSGNPV
LPSVVWFPAQ RDPDASVWLR GKPRLTLPDT PGIAVVLAAL RGTRVSVDIA ADFTSVAWRK
LLQNAVAGLM VLTGRRAGMF SRTDITTLSL AYLRECLEVA RAEGATLGDE VPQEIVDGFR
DSPPDLGTSI LADRLGGRPL EWESRNGVVQ QRGRLHGIPT PISDLVVPLL AAASDGPG
|
|---|
| |