Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_5152 |
Symbol | |
ID | 6278176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 1317239 |
End bp | 1318789 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642616240 |
Product | SSS sodium solute transporter superfamily |
Protein accession | YP_001888883 |
Protein GI | 187919852 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGCTAC TTACCATCGT GATTTTCATG ATCATTCTGG CGGTTACGCT GATGATCACT TACTGGGCCG CACGCAGGAC ACGGACGACA TCGGAGTTCT ACGCAGCCGG CGGGAACCTC AGCGCAAGGG AAAACGGGTT CGCACTTGCC GGCGACTGGA TGAGTGCCGC TGCGTTTCTG GGATTTTCGG GGCTGGTTTC GCTATATGGC ATGGACGGTT CGCTGTATGC GGTCGCTGCG CTCGCTGCGT TTCTCGTCGT ACTCATGCTG ATCGCCGAGC CGGTGCGTAA CACGGGACGT TACACCTTTG GTGACGTTAT CGCAGAGCGG ATGAAACGGC CGGGCGCGCG CCTCGCCACT ATTGTAGGAA CGGTGGTGGT CAATCTTGCC TACATGGTGC CGCAGATGGC CGGGGCCGGC GCGTTGATCA AACTGATGCT GGGCGTCCCC TACGACGTCG CAGTCGTCCT CGTCGGCATT GGCATGATCG TCTATGTTCT GTTCGGCGGA ATGATTGCGA CCACGTGGGT GCAGATTGTG AAGGCGATGC TGCTTCTTGT TGCCGCGTGC GTTCTTGTCT CGATGCTGCT GGCGGCTGTG CGGTTCAACC CGCTTGCACT GTTTGCATCT GTCGAAAGAC TCTACGGATC AAAAATGCTG GCGTCCGGCG GCTACTTCCA TCATCCACTG GACACGATGT CGCTTTTCAT TTCGTTCATC TTCGGTGTTG CCGGACTTCC TCACATCATG ACGCGATTTT ATACGGTCCC AGACGCAAGG ACTGCCCGGA AATCGGTCCT ATGGCTCATG TTTCTAGCCG GCAGTTTTTT CATGGTCACC ACGCTGATTG GGTTCGCTTC CGCGGTGTTC GTCGGCCAGG ACGCAATACG CGCCGCGGAC AAGGGGGGCA ATCTCGCACT TCCATTGCTC GCGCAGTATC TCGGCGGCGG AGCGGGCTCG CTGGGCGGAC AGATCTTTCT CGCCAGCATC TGCGCGATAG CTTTTGCCGC AATACTCGCA GTTGTCGCCG GGCTCACGCT CGCTTCCTCT GGCGCTATAG CCCACGATCT TTATGTGAAT GTCCTGCGTA AGGGGGCTGT CAGCGACGCT GAACAGGTCC GGGTCGCGCG TATCGCAACG GTTGCCGTGG GGATAGCCGC AATCGGTCTG AGTCTTCTCG CCCAGGGCCT GAATGTCGGC GTTCTCGTTA TTCTCGCCAT CTCGGTCGCG GCCTCCTCGA ATTTTCCGAT CATCCTGCTT TCGATTTTCT GGCGCCGTTT CAATACGGCC GGCGTGATCG GTGGCGTCAT TGGCGGGCTT ACCTCATCGG TTGCCCTTGC GTTCGTCGGT CCTGCTTTCA TGGGCAGCCA TGCGCTCTTT CCGATCGTCA ATCCGGCGAT CGTCAGTCTG CCGATCGGAC TCTTCAGCGC GTGGCTTTGC ACCATGCTGT CAAGGCCCAC ACCTACGCAG GATGGCGACT TCGAAGCGTT CTACCTGCGT GCGCAAACGG GCATCGTGTG TGATGCCACA TCATCCAGAT CTTCGCGGTA A
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Protein sequence | MKLLTIVIFM IILAVTLMIT YWAARRTRTT SEFYAAGGNL SARENGFALA GDWMSAAAFL GFSGLVSLYG MDGSLYAVAA LAAFLVVLML IAEPVRNTGR YTFGDVIAER MKRPGARLAT IVGTVVVNLA YMVPQMAGAG ALIKLMLGVP YDVAVVLVGI GMIVYVLFGG MIATTWVQIV KAMLLLVAAC VLVSMLLAAV RFNPLALFAS VERLYGSKML ASGGYFHHPL DTMSLFISFI FGVAGLPHIM TRFYTVPDAR TARKSVLWLM FLAGSFFMVT TLIGFASAVF VGQDAIRAAD KGGNLALPLL AQYLGGGAGS LGGQIFLASI CAIAFAAILA VVAGLTLASS GAIAHDLYVN VLRKGAVSDA EQVRVARIAT VAVGIAAIGL SLLAQGLNVG VLVILAISVA ASSNFPIILL SIFWRRFNTA GVIGGVIGGL TSSVALAFVG PAFMGSHALF PIVNPAIVSL PIGLFSAWLC TMLSRPTPTQ DGDFEAFYLR AQTGIVCDAT SSRSSR
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