Gene Bphyt_5138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_5138 
Symbol 
ID6278150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp1302614 
End bp1303534 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content57% 
IMG OID642616226 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001888869 
Protein GI187919838 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0174977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.89569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTGA GAAATGCTTC CATTGTGACC ATGACTCTAA AAACGATGCT CAGCCTCGCT 
TCACGTCTGT TCGGCCAGGC GGAATCCGCA CACAGTGTGG ATCGACCGCT TCTTGATAGT
CTGCTCGCAC TTGCGTGGGT GGTAGAGGCC CGAGACCCCT ACACCGGCGG ACATTTGTGG
CGAGTCTCCC GTTACGCGAG TCTGCTGGCA CGACAGATTG GTCTTTCGGA TCGCGATGCG
GCGAACGTCT CGGTGGGTGG ATTCCTGCAT GATCTGGGCA AAATCGCCGT TCCCGATTCG
GTCTTGCTCA AAACAGAGCG TTTGACCGCT GCGGAGTATG CCGTCATCAG AACGCACCCT
GAAGTCGGCA AACGACTGCT TGCGAAGCAC CCTTTCGGCG AACGCATCGC TGACGCAGTT
TACGCCCACC ACGAGCGACC CGACGGCAAG GCTTATCCGT TAGGCCTCGC TGGCAATGAG
ATCACCCCCA TGGCCGCAAT CATCGGCATC TGCGACGCCT TTGACGCCAT GACCAGTACA
CGCCCGTACC GTAAGGCAAT GCCGATTGAC GATGCCTTTG CTGTCGTACG CGACAATCTC
GGCACGCAGT TCAATCGCGA ATATGGAGAA ATGTTTCTGA CACTGGGTGG GAGCCTCAAC
CTGTACCACA TCGCAGGCCA TAGCGATGAA GGAATACCCC TCCAGTATTG CCAGACGTGC
GGTCCAACTG TGGTCGTCAG GTCGGATACA CTCAAGGATA CCGAAGTATA TTGTCCAGCC
TGCACAGCAG GCTACCGATT CAAAGGCATG TTCTCCACGA TGCTGCCGAC GGGAAACAAG
GCGAGTGCCG CCGACTTGGC TCCCTCACCA GACCTGGCAC TCATTGCGCG CGTTACGGGG
CAGCTACACA CCTTGTCATG A
 
Protein sequence
MSLRNASIVT MTLKTMLSLA SRLFGQAESA HSVDRPLLDS LLALAWVVEA RDPYTGGHLW 
RVSRYASLLA RQIGLSDRDA ANVSVGGFLH DLGKIAVPDS VLLKTERLTA AEYAVIRTHP
EVGKRLLAKH PFGERIADAV YAHHERPDGK AYPLGLAGNE ITPMAAIIGI CDAFDAMTST
RPYRKAMPID DAFAVVRDNL GTQFNREYGE MFLTLGGSLN LYHIAGHSDE GIPLQYCQTC
GPTVVVRSDT LKDTEVYCPA CTAGYRFKGM FSTMLPTGNK ASAADLAPSP DLALIARVTG
QLHTLS