| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5057 |
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| Symbol | ampC |
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| ID | 6278864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 1213704 |
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| End bp | 1214870 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642616148 |
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| Product | beta-lactamase |
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| Protein accession | YP_001888791 |
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| Protein GI | 187919760 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0475851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA AAGCCCTCTG CCTCACGGCA ACCGTGGCCT TTGCGTTGGC CCCTCCCATG
AGCCACGCAG CCGATGCCAC ACAAGACAGC ATCAAACGTA CGGTCGACGC GGCGATTCAG
CCGCTCATGG CGAAAGACGG CATTCATGGC ATGGCGGTCG GTGTCATCGT CGAGGGCAAG
CCTTATGTGT ACAACTACGG CGTGGCGTCG ACGGAAACCG GCAAGCCCGT GACGCGCGAC
ACGCTGTTCG AACTCGGCTC GATCAGCAAG ACCTTCACGG CGACGCTGGC TTCGTATGCG
CAGGTGAGCG GCGATCTTGC CCTGTCGGAT ACGACGAGCA AATATTTGCC CGTGCTTCAG
GGCAGCCGGT TCGGCAACGT GAAGCTGGTC AACCTGGGCA CGCATACGCC CGGTGGGCTG
CCCTTGCAGG TGCCGGACGA AATCCATAAC ACCGACGAAC TCATGCAGTA TTTCAAGGCA
TGGCAGCCCA GTTGCGCGCC GGGCACGTGC CGGACTTACG CCAATCCGGG CATCGGCACG
CTCGGATTGA TTACCGCAAA GAGCATGGGG CGGGATTTCA CGGCGTTGAT GGAACAGCGC
ATGTTTCCTG CACTGGGGTT GAAGAACAGT TATATCGACG TTCCGACAGC ACGCATCCCA
GACTACGCGC AAGGCTACAA GAAAGACGGT GCGCCGATCC GCATGGCGCC CGGCGTGCTG
TCGGCCGAAG CCTATGGCGT CAAATCCACC GCCGCCGACA TGACGCGCTT CATGCAGGCC
AACATGAATC TGCTCCCACT CGACGCGAAG CTGCAGCGCG CGATCACGGA CACGCACACC
GGCTACTTCA AGGCAGGTGT GCTGACCCAG GATCTGATCT GGGAACAATA CGCGTGTCCG
GTCGCGCTGA AGACATTGCT GACGGGCAAT TCATCGGCGA TGGTCTTGAA CGCGACGTCC
GCGGTCGAAA TCAAGCCGCC GCTCGCGCCT CGTTCAAACG TGTGGATCAA CAAGACCGGT
TCGACCAACG GCTTCGGCGC GTATGTGGCT TTCGTGCCCG AGAAGCAGTT GGGCATTGTG
ATGCTGGCCA ACAAGAACTT CCCGAACGAG GATCGGGTGG CTGCTGCTTA TAAGATTCTG
ACGGCGCTTG CCGGGTCCGC GCATTGA
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| Protein sequence | MKFKALCLTA TVAFALAPPM SHAADATQDS IKRTVDAAIQ PLMAKDGIHG MAVGVIVEGK
PYVYNYGVAS TETGKPVTRD TLFELGSISK TFTATLASYA QVSGDLALSD TTSKYLPVLQ
GSRFGNVKLV NLGTHTPGGL PLQVPDEIHN TDELMQYFKA WQPSCAPGTC RTYANPGIGT
LGLITAKSMG RDFTALMEQR MFPALGLKNS YIDVPTARIP DYAQGYKKDG APIRMAPGVL
SAEAYGVKST AADMTRFMQA NMNLLPLDAK LQRAITDTHT GYFKAGVLTQ DLIWEQYACP
VALKTLLTGN SSAMVLNATS AVEIKPPLAP RSNVWINKTG STNGFGAYVA FVPEKQLGIV
MLANKNFPNE DRVAAAYKIL TALAGSAH
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