Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4927 |
Symbol | |
ID | 6278340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 1057707 |
End bp | 1058663 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642616013 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001888661 |
Protein GI | 187919630 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.364408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.198885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTGACA GAATAACTGC AATGCGCACC TTCATCCGAA TCGTGGACAC CAACAGCTTC ACCCGCGCAG CGGAATCACT AAACATTCCG CGCGCCACGG CGACCACCAT CGTCCAGAAC CTGGAAGCCC TGCTAGGCAC AGTCCTTCTA GCCCGCACGA CGCGGCGCTT AAGCGTCACC CCTGAAGGCG CGGCCTACTA CGAGCGCTGC ACGCAAATTC TCGCCGACAT CGACGAAATG GAAGCCAGCA TCCGTCACGC GACGGACAAC CTGACCGGCC GTCTGCGCAT CGAAATGCCC GGCGCTGTAG CCAGCGCCAT CGTGCTGCCG GCTCTCGACG ACTTCCATAC CCGTTACCCG AACCTCGATC TCGCAATCGG TATCAGCAAC CGCACAGTCG ACCTGATCAC CGAAGCCATC GACTGCAGCA TCCAGCTCGG CGAATTGCCA GACTCGAATC TCGTCGCGCG CCAACTCGGC ACGCTCGAAC ACGTGACCTG CGCGAGCCCA GCCTACCTGG CCCGCTACGG CACGCCCACG GATCTCGACG ATTTGCGTGG CCATTCAGCC GTCAATTGCA TGTCGCCGCA TAACGGCCGC GAAGTGGACT TCGATTTCGA AGTGAACGGC GAAGCGCAAA ACGTGAAGGT GAAAGGCTTC GTCAAAGTCA GCGACGAACA GGCCTATCTC ACCTGCGGCC TGCAAGGCCT CGGCTTGATC CAGCCCGCGC GGATCGCCGC GCAACCGTAT CTCGACTCGG GACTATTGCG CGAAGTCATG CCGCAATGGA AACCGGTGCC GATGCCGGTC TCGGTCGCTT ATGTAAAGAA TCGCCGCGTG TCGCCACGCG TGCGCGCGTT CGTGGATTGG CTGGCGGAAT TGTTCGAGAA AGCGGAGCAC GTCGATCAGG ATCTCTCGCG TGTCCGTCAA TTGCTGCGCG GCCTGCATCC CGCCTGA
|
Protein sequence | MIDRITAMRT FIRIVDTNSF TRAAESLNIP RATATTIVQN LEALLGTVLL ARTTRRLSVT PEGAAYYERC TQILADIDEM EASIRHATDN LTGRLRIEMP GAVASAIVLP ALDDFHTRYP NLDLAIGISN RTVDLITEAI DCSIQLGELP DSNLVARQLG TLEHVTCASP AYLARYGTPT DLDDLRGHSA VNCMSPHNGR EVDFDFEVNG EAQNVKVKGF VKVSDEQAYL TCGLQGLGLI QPARIAAQPY LDSGLLREVM PQWKPVPMPV SVAYVKNRRV SPRVRAFVDW LAELFEKAEH VDQDLSRVRQ LLRGLHPA
|
| |