Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4621 |
Symbol | |
ID | 6279383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 705252 |
End bp | 705782 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642615709 |
Product | TadE family protein |
Protein accession | YP_001888362 |
Protein GI | 187919331 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4961] Flp pilus assembly protein TadG |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.37805 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCG CTCGCCACAC GTCGATCTTT AGCGGGGAGG TGCGCGCAGG CAGGCGCGGG CTCACGCGCA AGCAACGCGG CGTGGCCACG ATCGAGTTTG CATTGATCGC GCCGCTGCTG CTTCTGTTGG TGTGCTTTGC GATGGATCTC GGCATTGCGC TGTGGGTCAA TCTGACCATG CAATACGCGG TGCGGGAAGG CGCGCGCTAT TCGGTAACGG GGCAGACCAA CCTCGATCCG AACGCGACCA ATCAGCAGCG CTATCTGGCT GTCGTGCAGG AGATCAAAAA CAGCTCGATG GGTCTCTATT CGCTCGTCTC CCCGAGTTAC GTGATCACCA TCAACGGGGC GACTCAAAGC TACAACACGC AAACAAGTTA CAGCACCGGC ATGTTCGGCA ATCCGGGCGA CATCGTGGTG CTGCAGATCA ACTGCATCTG GCCGCTTCTG ACGCCGCTGG TCAAGCCGTT CTTCGCCAAT GGCAAGTTCA GCTTCAGTGT CGCGGCGACG ATGCGCAACG AGGGCTTCTG A
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Protein sequence | MKSARHTSIF SGEVRAGRRG LTRKQRGVAT IEFALIAPLL LLLVCFAMDL GIALWVNLTM QYAVREGARY SVTGQTNLDP NATNQQRYLA VVQEIKNSSM GLYSLVSPSY VITINGATQS YNTQTSYSTG MFGNPGDIVV LQINCIWPLL TPLVKPFFAN GKFSFSVAAT MRNEGF
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