Gene Bphyt_4594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4594 
Symbol 
ID6278068 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp676596 
End bp677243 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content61% 
IMG OID642615683 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_001888336 
Protein GI187919305 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATT GGACGAATAT TCTGGCGGCG GTGCGCGTGG GCGGATGGGT GATCTATCCG 
CTCACGGTAC TTGCTGTTGT GGCGGTTGCG ATCGTCCTCG ATCGCGCCTA TGTGTTTTTG
CGTTTCGGCC GTCTGCCGCC GGGCGCCGAC GACGCGCACG GAATTCACAT GCCCGCATCT
TCCACCGGCA TGGACAACGG ATTGAATCAT GCGCCACGTC AGAACGTATT CAAACGTATG
AGTACATCGT GGAGGCCCGA TGCATCCGTT CCGCTGTGGC TGCGCGAAGC CAATGCGCAA
TCGGTCGCTT CGCAGATCGA GCGCGACATG AGCAAGGGTT TCTGGGTGCT GGAGACGATC
GTCACGGCCG CGCCGCTGTT GGGCTTGCTC GGCACCATCG TCGGCATGAT GCATTCGTTT
CAGCTGTTCG GCGGCACGGG GCTCGTCGAT CCGGCCGGCG TCACCGGCGG CGTCGCGCAG
TCGTTGGTGG CGACGGCGAT CGGTCTCGTC GTCGCGCTGT TCGCACTCTT CGCGTTCAAC
TATTTTTCCC GTCGGCTTGA GCGCCTGATG GATGAACTCG AATCGTTCGC GACTGCACGG
CTCGGTGAAA TACGTCTTGC CACGAGCGTT GCGGGAGCGC AGTCGTGA
 
Protein sequence
MQDWTNILAA VRVGGWVIYP LTVLAVVAVA IVLDRAYVFL RFGRLPPGAD DAHGIHMPAS 
STGMDNGLNH APRQNVFKRM STSWRPDASV PLWLREANAQ SVASQIERDM SKGFWVLETI
VTAAPLLGLL GTIVGMMHSF QLFGGTGLVD PAGVTGGVAQ SLVATAIGLV VALFALFAFN
YFSRRLERLM DELESFATAR LGEIRLATSV AGAQS