Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4563 |
Symbol | |
ID | 6278062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 640131 |
End bp | 640898 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642615653 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_001888306 |
Protein GI | 187919275 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0238722 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACGC TGGCTCATCC GCTCGAACCA GACGACGCAA CGCTATCCGG CATGCTGTCG CACTTCAGGC TGCTCGAGCC TGTCTTCGAC GCGATGCCGG ACGTCGTGTT CTTCGTCAAG GACGCCGAGG CGCGCTACGC GCTGGTCAAC CGCACGCTCG CGTCGCGCTG CGGCTTCAAG GAAAAATCCG CGCTGCTCGG CCGCACCGCC GAGGACGTGT TCCCGCGCCG CTTCGGACGC ATCTACACGG CGCAGGACAA GGCGATCATC AGCGTCGGCA ACCAGATGAT CGACCAGCTG GAACTGCATC TGTATCCCGG CCGTCAGCCG GGCTGGTGTC TGACCTGCAA GCAGCCGCTG CGCGATCCTG CCGGCAAAGT GGTGGGTCTC GCCGGTATTT CCCGCGATCT GAAAGCGGAC GAAAGCAGCC ATCCCGCCTA CAGCCGCCTC GCCGCGGTCG TGCAGTCCAT TCAGGAAAAT TACGTTCAGC CTTTGAATCT GAAGCAACTC GCGGCCATGG CGAATATGTC GGTCGCGCAA CTGGAGCGCT ACTTCCACAA GGTTTTTCAT CTGACGCCGC GCCAGGTGTT GCTGAAAACC CGTCTGGACG CCGCCACGGC GCTGCTGGTG TCGCACGACA AGGTCACCGA CGTCGCCGCG CTGTGCGGCT ACACCGACCA CAGCGCGTTC ACACGCCAAT TCAAGGCGAC CGTCGGCATT ACTCCGACCG AGTACCGCAT GCTGCTGCAC GGCACTTCGC GGAGTTGA
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Protein sequence | MNTLAHPLEP DDATLSGMLS HFRLLEPVFD AMPDVVFFVK DAEARYALVN RTLASRCGFK EKSALLGRTA EDVFPRRFGR IYTAQDKAII SVGNQMIDQL ELHLYPGRQP GWCLTCKQPL RDPAGKVVGL AGISRDLKAD ESSHPAYSRL AAVVQSIQEN YVQPLNLKQL AAMANMSVAQ LERYFHKVFH LTPRQVLLKT RLDAATALLV SHDKVTDVAA LCGYTDHSAF TRQFKATVGI TPTEYRMLLH GTSRS
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