Gene Bphyt_4526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4526 
Symbol 
ID6278736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp596483 
End bp597283 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID642615616 
Productalpha/beta hydrolase fold 
Protein accessionYP_001888269 
Protein GI187919238 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.580548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGT GGATTCTGCT ACGCGGTCTC ACGCGTGAAG TTCGCCACTG GGGCCGCTTG 
CCCGGCTTGC TGCATGGCGC AGTGAATGAA TCGGCCCTTC ACATAGGCGC GCTCGGCCGT
CTGCTGCTGC TCGATCTGCC GGGCAACGGC GAATTCGCGC ATTTGCGCGC GCCGTCGACG
GTCGCCGACA TGGTCGGCTT CGTGCGCAAT GCTGCTCTGC AAAGCGGCAT GCCGGGTCCC
TATTGCGTGC TGGCGATGTC GCTCGGCGGC ATGGTGGCGA CGGACTGGGC GCAACGGCAT
CCCTACGAGA TCGAGCGGCT GGTGCTGATC AATACGAGCA TGCGGCCGTT CAGCCAGATG
CAGGAGCGCT TGCGTCCTTC GGCATGGTCC GGCCTGCTGG GCGTGGCCGC GCACTGGCGC
GACGCGCCGC GCGCGGAACA CGGCATTCAT CGGCTGACAT GCAATAACGT GCAGACGCTC
GGCGACGATC TCGACGCCTG GAGCCGGATT CGCCGCAGCG CGCCCGTGAG CCGTGGCAAC
GCGTTACGGC AACTGTGGGC CGCGGCACGT TTCACCGCGG GCGCGGCGCG GCCGGAATGC
CCATTGCTGA TCCTCTCTTC GCGTGTCGAC AAACTGGTCG ACCCCGTGTG CTCGGCAAAG
CTGGCGGCGG CTTGGGGCGC CCTGCATTGC GAGCATCCAT GGGCCGGTCA CGACCTGCCG
CACGACGATC CGGCATGGAC CAGCGAACAG GTTCGCGCAT GGCTCGCGCA GGAGCATGCG
GTTCCCCGGG CCGTGCTTTA A
 
Protein sequence
MSTWILLRGL TREVRHWGRL PGLLHGAVNE SALHIGALGR LLLLDLPGNG EFAHLRAPST 
VADMVGFVRN AALQSGMPGP YCVLAMSLGG MVATDWAQRH PYEIERLVLI NTSMRPFSQM
QERLRPSAWS GLLGVAAHWR DAPRAEHGIH RLTCNNVQTL GDDLDAWSRI RRSAPVSRGN
ALRQLWAAAR FTAGAARPEC PLLILSSRVD KLVDPVCSAK LAAAWGALHC EHPWAGHDLP
HDDPAWTSEQ VRAWLAQEHA VPRAVL