Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4410 |
Symbol | |
ID | 6279700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | + |
Start bp | 473921 |
End bp | 474676 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642615503 |
Product | extracellular solute-binding protein family 3 |
Protein accession | YP_001888156 |
Protein GI | 187919125 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGC AACGACTGTT GTCTCTCGCC TGCGTCACGG TTGCCGTGAC TTTCGCCGGC TTCTCCGGCG CCGCATCGGC GCAAACGCCG GATGTGCTGA ACGTGGCCAC CGACGCTACC TTCCCGCCCA TGGAGTACAC CGAAAATGGC GCACGCACCG GCTTCGACGT GGACCTGATG AATGCGCTCG CCAAGGCGAT GGGCAAGAAG GTGCAATGGA CCGACATCGA CTTCAAAGGT CTGATTCCCG GCCTGATCGC CCACCGTTTC GATGCGGCGA TTTCCGGCAT CTACATCACC GACGAACGCG CGAAGGTGGT CGACTTCACC GACTCCTACT ATGCCGGAGG CCTCGTCGTG CTGGTGAAGA GCAATTCGCC TATCAAGTCG GTGGAAGAAC TGAACGGCAA GAAAGTCTCG GTCCAGGTGG GCACCAAATC GGTCAACTTC CTGCGCGACA ACTTCCCGCA GATCAATCGC GTGGAAGTCG AAAAGAATCA AGAAATGTTC GATCTCGTGG GCATTGGCCG CGCTGACGCC GCCGTAACCG GCAAGCCGGC CGCCTATCAG CTCGTGAAGA CGCGCGGCGG TTTCCGTGTG CTCGACAAAC CGCTTACGAC CGAAGCGTAT GGGATTGCCG TGCGCAAGGA CGAGCCGCAA CTGAAGGCCG CGTTCAATAC AGCGCTCGCG AAAATCAAGG CCGACGGCAC GTATGCGGCG ATCGTCAAGA AGTGGTTCGG CGCAACGGCG CAATAA
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Protein sequence | MKLQRLLSLA CVTVAVTFAG FSGAASAQTP DVLNVATDAT FPPMEYTENG ARTGFDVDLM NALAKAMGKK VQWTDIDFKG LIPGLIAHRF DAAISGIYIT DERAKVVDFT DSYYAGGLVV LVKSNSPIKS VEELNGKKVS VQVGTKSVNF LRDNFPQINR VEVEKNQEMF DLVGIGRADA AVTGKPAAYQ LVKTRGGFRV LDKPLTTEAY GIAVRKDEPQ LKAAFNTALA KIKADGTYAA IVKKWFGATA Q
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