Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_4166 |
Symbol | |
ID | 6277540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010676 |
Strand | - |
Start bp | 210607 |
End bp | 211944 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642615266 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001887919 |
Protein GI | 187918888 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.0754013 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCAAAT CGCTCCGCAA CCAACTTGTT ATCGCACTCG GTGCCGTGGT GAGCCTGTTC GCCATTCTGC AAGGCGTCAG TTCCTACCAG TTCTGCGTGG CCGGTATGAG CGCGGTGCTC GACCTGCGCA TGGAACAGGT CGCCTCGCGT TTGCGAGTCG GCTTCGGCGA GGGCATCCCG ACGGTCCCTG CGCGCGGGTC GCAAGACGCG CGCGATATCT TCATCGTTAT GTGGAAAGAT GGCGAGACGC AGCCGGTGCG CACTACTGAG CCGTCGCTGC TTCTGCCGCG CAATGCGGTC GAGGGCTTCT CGTCGCCGAT CGTGAATGGC GAAGGCTGGC GGATCTATAC GGCTCGCGAC GGCGCTCAAA CCGTGCAGGT CGCGCAGCGC CTGTCCGTAC GTCACGAGAT CGAGGAGACC GCCGCGACGA AGACGCTATG GCCGATTGTC GTGCTGATCC CGCTCGTTTG GGCCGCTGTT ATCTTCGTCG TGAGTCGTTC GTTGCGGGAA CTGAACCGGC TCGGCAACAA GGTTCGCGAT ATCGACGTGA ACCATCTGCA GGCGCTGCCG CTCGCGCGCG TACCTACTGA ACTGCTGCCA TTCATCCGCT CAATCAATCT GATGATCGAG CGGCTAGCCC GCTCCATCGA GAGCGAACGC AAATTCATTT CCGATGCCGC GCACGAATTG CGAACGCCGC TCACGGCTCT GCAATTGCAA GCCGATAATC TGCAACGCGA CGTCATGCCG AGCAACCAGG AGCGGTTTCG CGCGCTCCAA GGCGGTATCG CGCGAAGCAG CAATCTGATT TCGCAGTTGC TGCGGCTCGC GCGCGCGGAC GCCCCGCCGG TGGGTCAATC GATGACACGG GCAATGATCA GCGTCGATGT CTCGGCCGCC GTCGTCAATG CCATTTCCGA TGTCCTGCCG ATTGCCATGC AGCGTGGCAT CGATATCGGC GCGGACGAAA TGGTCAGCGC CAAGGTGCGC GCAATCGAGC TCGACATCGG CACGGTGATC AAGAATCTCG TCAGCAATGC GGTTCGCTAT ACGCCCGACG GCGGCACAAT CGATTTGTCG ACCCGCGTGC ATGACGGCAT GGTTTCTGTC GAAGTGAAGG ACACCGGTTC CGGCATCGAC GAAACTCTGC TGCCCCGCGT GTTCGACCGG TTCTTTCGCG CCAATACGGA CATTGAAGGC AGTGGCCTCG GACTGTCGAT CGTGAAGGCG ATTGTCACGC GGTACGGCGG TACGGTGACG CTGCGCAATC GCGATGACGG GCAGTCCGGC ATTGTGGCGA CGGTCAGTCT TCCGATCGAG CCGGACGGGG CGGGTTGA
|
Protein sequence | MLKSLRNQLV IALGAVVSLF AILQGVSSYQ FCVAGMSAVL DLRMEQVASR LRVGFGEGIP TVPARGSQDA RDIFIVMWKD GETQPVRTTE PSLLLPRNAV EGFSSPIVNG EGWRIYTARD GAQTVQVAQR LSVRHEIEET AATKTLWPIV VLIPLVWAAV IFVVSRSLRE LNRLGNKVRD IDVNHLQALP LARVPTELLP FIRSINLMIE RLARSIESER KFISDAAHEL RTPLTALQLQ ADNLQRDVMP SNQERFRALQ GGIARSSNLI SQLLRLARAD APPVGQSMTR AMISVDVSAA VVNAISDVLP IAMQRGIDIG ADEMVSAKVR AIELDIGTVI KNLVSNAVRY TPDGGTIDLS TRVHDGMVSV EVKDTGSGID ETLLPRVFDR FFRANTDIEG SGLGLSIVKA IVTRYGGTVT LRNRDDGQSG IVATVSLPIE PDGAG
|
| |