Gene Bphyt_4166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_4166 
Symbol 
ID6277540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010676 
Strand
Start bp210607 
End bp211944 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content62% 
IMG OID642615266 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001887919 
Protein GI187918888 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.0754013 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAAT CGCTCCGCAA CCAACTTGTT ATCGCACTCG GTGCCGTGGT GAGCCTGTTC 
GCCATTCTGC AAGGCGTCAG TTCCTACCAG TTCTGCGTGG CCGGTATGAG CGCGGTGCTC
GACCTGCGCA TGGAACAGGT CGCCTCGCGT TTGCGAGTCG GCTTCGGCGA GGGCATCCCG
ACGGTCCCTG CGCGCGGGTC GCAAGACGCG CGCGATATCT TCATCGTTAT GTGGAAAGAT
GGCGAGACGC AGCCGGTGCG CACTACTGAG CCGTCGCTGC TTCTGCCGCG CAATGCGGTC
GAGGGCTTCT CGTCGCCGAT CGTGAATGGC GAAGGCTGGC GGATCTATAC GGCTCGCGAC
GGCGCTCAAA CCGTGCAGGT CGCGCAGCGC CTGTCCGTAC GTCACGAGAT CGAGGAGACC
GCCGCGACGA AGACGCTATG GCCGATTGTC GTGCTGATCC CGCTCGTTTG GGCCGCTGTT
ATCTTCGTCG TGAGTCGTTC GTTGCGGGAA CTGAACCGGC TCGGCAACAA GGTTCGCGAT
ATCGACGTGA ACCATCTGCA GGCGCTGCCG CTCGCGCGCG TACCTACTGA ACTGCTGCCA
TTCATCCGCT CAATCAATCT GATGATCGAG CGGCTAGCCC GCTCCATCGA GAGCGAACGC
AAATTCATTT CCGATGCCGC GCACGAATTG CGAACGCCGC TCACGGCTCT GCAATTGCAA
GCCGATAATC TGCAACGCGA CGTCATGCCG AGCAACCAGG AGCGGTTTCG CGCGCTCCAA
GGCGGTATCG CGCGAAGCAG CAATCTGATT TCGCAGTTGC TGCGGCTCGC GCGCGCGGAC
GCCCCGCCGG TGGGTCAATC GATGACACGG GCAATGATCA GCGTCGATGT CTCGGCCGCC
GTCGTCAATG CCATTTCCGA TGTCCTGCCG ATTGCCATGC AGCGTGGCAT CGATATCGGC
GCGGACGAAA TGGTCAGCGC CAAGGTGCGC GCAATCGAGC TCGACATCGG CACGGTGATC
AAGAATCTCG TCAGCAATGC GGTTCGCTAT ACGCCCGACG GCGGCACAAT CGATTTGTCG
ACCCGCGTGC ATGACGGCAT GGTTTCTGTC GAAGTGAAGG ACACCGGTTC CGGCATCGAC
GAAACTCTGC TGCCCCGCGT GTTCGACCGG TTCTTTCGCG CCAATACGGA CATTGAAGGC
AGTGGCCTCG GACTGTCGAT CGTGAAGGCG ATTGTCACGC GGTACGGCGG TACGGTGACG
CTGCGCAATC GCGATGACGG GCAGTCCGGC ATTGTGGCGA CGGTCAGTCT TCCGATCGAG
CCGGACGGGG CGGGTTGA
 
Protein sequence
MLKSLRNQLV IALGAVVSLF AILQGVSSYQ FCVAGMSAVL DLRMEQVASR LRVGFGEGIP 
TVPARGSQDA RDIFIVMWKD GETQPVRTTE PSLLLPRNAV EGFSSPIVNG EGWRIYTARD
GAQTVQVAQR LSVRHEIEET AATKTLWPIV VLIPLVWAAV IFVVSRSLRE LNRLGNKVRD
IDVNHLQALP LARVPTELLP FIRSINLMIE RLARSIESER KFISDAAHEL RTPLTALQLQ
ADNLQRDVMP SNQERFRALQ GGIARSSNLI SQLLRLARAD APPVGQSMTR AMISVDVSAA
VVNAISDVLP IAMQRGIDIG ADEMVSAKVR AIELDIGTVI KNLVSNAVRY TPDGGTIDLS
TRVHDGMVSV EVKDTGSGID ETLLPRVFDR FFRANTDIEG SGLGLSIVKA IVTRYGGTVT
LRNRDDGQSG IVATVSLPIE PDGAG