| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4147 |
|---|
| Symbol | |
|---|
| ID | 6279912 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010676 |
|---|
| Strand | - |
|---|
| Start bp | 186321 |
|---|
| End bp | 187484 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642615247 |
|---|
| Product | Patatin |
|---|
| Protein accession | YP_001887900 |
|---|
| Protein GI | 187918869 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.649145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACG AAACGCACGT CGAACATCAG ACCGGCGCAA GTGACACTCC GCATTCGCCG
CCGGACATTC CCGGCCAGAT CGTGCTGGTC TTTCAGGGCG GCGGCGCCCT CGGTGCTTAC
CAGGCCGGGG TGTATCAGGC GCTTCACGAC GGCAAAGTCG AGCCTCATTG GGTCATCGGC
ACCTCGATCG GCGCGATAAA CGGCGCGATC ATCGCCGGCA ATCTGCCTGA GAATCGTATG
GCGCGTCTGA CCCGGTTCTG GAACGGCGTG GCACGCCAGG GCATGGAAGC GGCAAACTGG
CTGCCGGGAC TCGCAAACTG GCTGCGCGAT TTTGTCACGG TCACTCAAGG CGTGCCGTCG
TTTTTCACAC CGCAGTTGCA GTCGTGGGCG GGCCTTCAGG CACGCGTTCG TTCCGATCAG
GCAGCTTTCT ATTCGACCGG ACCGCTGCGC GAAACCCTGG CTTCGCTAGT GGATTTCGAC
TACCTGAACC AGAAGACGAC TCGGCTGACC GTCGGCACGG TCAATGTCCG CAGTGGACGC
ATGCGCTACT TCACGAATCG CGATGCGTTG CTGGACGTCG AACACGTGAT GGCTTCCGCC
GCTTTTCCGC CCGGCTTCCC GGCGGTGCAA CTGGAAGGCG AATCGTACTG GGACGGCGGC
ATCTATTCGA ATACGCCGCT CGAAGCCGTG CTCGACGACC GCCCGCGGCG CGACTCGGTG
ATCTTCTCGG TGCAGTTGTG GCCTTCGAGC GGTCCTGAGC CCGAGTCGAT CTTGCAGGTC
ATGAGCCGGC AACGCGACAT TCAGTACTCG AGCCGCGCGG AGAGTCATCT CGATCGACAG
AAGCAGATTC ACCGCTTGCG TCACGTGATC CGCGAACTGG GCCAGCATCT GCCCGAAGCG
GCACGCAATG ATCCGCAGGT GCGCGAACTG CTCGGCTGGG GCTGCGGCAC GACGATGCGC
GTGCTGGAAC TCGACGCACC GGCATTCGAT AACGACGATC TGAACCGGGA CATCGATTTC
TCTTCGGCCG GCATCGAACG GCGCTGGCTT GCGGGTTACG AAGACACGGT CCGCTTGCTG
AAGCGCGCGC CGTGGCGAGA AACACTGGAC CCGATGGAAG GCCTCTCGGT CTTTCGCATG
GCCTCGGCGG AAAGCCAGCA ATAA
|
|---|
| Protein sequence | MSNETHVEHQ TGASDTPHSP PDIPGQIVLV FQGGGALGAY QAGVYQALHD GKVEPHWVIG
TSIGAINGAI IAGNLPENRM ARLTRFWNGV ARQGMEAANW LPGLANWLRD FVTVTQGVPS
FFTPQLQSWA GLQARVRSDQ AAFYSTGPLR ETLASLVDFD YLNQKTTRLT VGTVNVRSGR
MRYFTNRDAL LDVEHVMASA AFPPGFPAVQ LEGESYWDGG IYSNTPLEAV LDDRPRRDSV
IFSVQLWPSS GPEPESILQV MSRQRDIQYS SRAESHLDRQ KQIHRLRHVI RELGQHLPEA
ARNDPQVREL LGWGCGTTMR VLELDAPAFD NDDLNRDIDF SSAGIERRWL AGYEDTVRLL
KRAPWRETLD PMEGLSVFRM ASAESQQ
|
|---|
| |