| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_4079 |
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| Symbol | |
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| ID | 6280484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | - |
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| Start bp | 112566 |
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| End bp | 114749 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642615180 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001887833 |
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| Protein GI | 187918802 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAAAT TCTTTGTCGC CGGCCGACCG GCGTTTGTGC GCGGCCCACG CCGCACTCCC
TCGCTGTTGA GCGCGGGCCT TCTGGCAAGT GTCGGTTTGA CGCTTTCCAC GCTGTCGACT
TCGGGTTGGG CGCAGGTCGC GGCCAGCGAC GCCGGCACGA CGCTGCCGGC CGTGAGCGTC
TCGGCGGCAA AAGACACCAC TGTGGCCCAG GCCGACACCA TCAGCGCGGG CGCGCTGGGT
TCGCGCAAGC AGGTGGACAC GCCGTTCTCG ACCCACGTCG TGACGAGCGA CGAGGCGCAG
GACCTGTTCG CGACAACCGC CAACGATCTG TACAAGTACG ATCCGGCGGT CTCGGTGATC
AGCGACAACG GTGTCAGCGA AAACTCGATG TTCACCGTGC GCGGCATGCC GATCGACACG
CTGAACAGCG TCAAGGTGGA CGGCCAGACT TTCCCCTCGT GGGATACCGA CCTCTCGCTG
GAGCCGTTCG AGCAGGTCGA ATTGCTCAAG GGCCTGTCGG GCTTCATGTA CGGCTTCGGC
TCGCCGGGCG GCATCGTGAA CTACGTGTTG AAACGCCCCA CCGACACGCC GTACCGCAGC
ATCTCGGTCG GCTACAAGTC GGCCGGCGTG TTCAGCGAGG CGGTGGATCT GGGCGGCCGC
TTCGGCAATG ACGATCGTTT CGGCTACCGC CTGAACCTCG CCAACGAAAA CGGCAACACC
GCCGAAGACC ACGGCCACGT GCGCCGCCAG GTCGCGTCGC TCGCGTTCGA CTTCCGCATC
ACGCCGGACC TGACGTGGAG CGCCGACGCG TTTTACCAGA AGCGCAGAAC CAACGGCACG
CTGTTCGGCC TGATGTTCGG TGGCGACGCC GGCGGCATTC CCGACGCGAG CAAAGTCACC
CACGCGCTCA CGCAACCGCA GAACTACTAC GAGACCGAGA TGGCCTCGTT CGGCACGGGC
CTGGATTACC GCATCTCCGA AAACTGGCAT GCGAGCATCA AGTACCGCTT CGCCAAGGAG
AACCGCACTA ATTCGGACAG CTTCCTGTTC GTCACCGACC CCGCAGGCAA CTACTCGAAC
ACGCTCTATG CGGCCCTCAC GCGCTACTTC TATCAGAACG TCGACGGCAT GGTGCAAGGG
CATTTCAACA CGGGCACCAT CAAGCACGAT GTGGTGGTGG GCGCAGGCTT TCTGACGCAA
ACCAGTGAGT ACAGCAACAG CACGGGGTGG AACGAAGGCT ACTTCCTCGG CAACGGCAAT
CTGTACGCCA GCACCTTGCT GACCAACGAC GAAGTCAGCA TCAGCTCGAA CCTGTACCGT
CAGCAGCGCA CCACGCAAGC CGCCGTGTAC GCGAGCGACA CCGTGCAACT TACGTCGCGT
CTGGCGGCGC TGGTCGGCGT GCGCTATACG CAATACCAGC AGCACGTGTA CGACCCGAGC
GGCGCGGTGT CGTCGCAATA CCAGGCGGAC CCGGTCACGC CGACCTTCGC GCTGATGTTC
AAGACCGATC CGTACTCCAC GCTGTACGTG AGCTACGTGG AGTCGCTGGA ACAGGGCGGC
GCGGCGTCGA ACACCAACCT CAACTACCCG GACACGTTCG GCCCGCTGCG CAGCAAGCAG
TACGAAGTCG GCTTCAAAAC CGATCACGCG AAGTGGGGCG CCAACCTCGC GCTGTTCCGC
GTCGATCAGG GTTACAACTA CACGAACGTC GACAACATCT TCGTGCAGGA CGGCACCAAG
CGCTATCAAG GCCTCGACGC GAGCGGCTGG CTTGCGGTCA CGAGCGAATG GCGCGTGCTG
GGCGGCGTGA TGTGGCTCGA CACGAAGGCC ATGGACGTGA ACGATCCGAC CGTGGAAGGC
AAGCGCATCT ACGGCGCGCC GCGCTTCACC GTGACGGGCC GGATCGAATA CAACCCGTCG
TATCTGCGTC CGCTGACGCT GGCGTTCGGC GGCAAGTATG TGGGCAACCA GGCCGTCGAC
GCGCAGAACA CGCAGTTCGT GCCGGCTTAC ACCACGTTCG ATCTGAGCGG ACGGTATGAG
ACGAAGATCG CCGGCAAGGA CGTGACGTTC CGCGCGGGCA TCAACAACCT GTTCAATCGC
CGTTACTGGA CGACGGCGTG GGGCTACTAC GTGGCGCCGT CGGCGACGCG CACTGCCGTG
GCCAGCGCAA CGCTGCAGTT CTAA
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| Protein sequence | MQKFFVAGRP AFVRGPRRTP SLLSAGLLAS VGLTLSTLST SGWAQVAASD AGTTLPAVSV
SAAKDTTVAQ ADTISAGALG SRKQVDTPFS THVVTSDEAQ DLFATTANDL YKYDPAVSVI
SDNGVSENSM FTVRGMPIDT LNSVKVDGQT FPSWDTDLSL EPFEQVELLK GLSGFMYGFG
SPGGIVNYVL KRPTDTPYRS ISVGYKSAGV FSEAVDLGGR FGNDDRFGYR LNLANENGNT
AEDHGHVRRQ VASLAFDFRI TPDLTWSADA FYQKRRTNGT LFGLMFGGDA GGIPDASKVT
HALTQPQNYY ETEMASFGTG LDYRISENWH ASIKYRFAKE NRTNSDSFLF VTDPAGNYSN
TLYAALTRYF YQNVDGMVQG HFNTGTIKHD VVVGAGFLTQ TSEYSNSTGW NEGYFLGNGN
LYASTLLTND EVSISSNLYR QQRTTQAAVY ASDTVQLTSR LAALVGVRYT QYQQHVYDPS
GAVSSQYQAD PVTPTFALMF KTDPYSTLYV SYVESLEQGG AASNTNLNYP DTFGPLRSKQ
YEVGFKTDHA KWGANLALFR VDQGYNYTNV DNIFVQDGTK RYQGLDASGW LAVTSEWRVL
GGVMWLDTKA MDVNDPTVEG KRIYGAPRFT VTGRIEYNPS YLRPLTLAFG GKYVGNQAVD
AQNTQFVPAY TTFDLSGRYE TKIAGKDVTF RAGINNLFNR RYWTTAWGYY VAPSATRTAV
ASATLQF
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