Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3962 |
Symbol | araH |
ID | 6284557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4438704 |
End bp | 4439708 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642623549 |
Product | L-arabinose transporter permease protein |
Protein accession | YP_001897573 |
Protein GI | 187925931 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGACAC CTTCAACCGA TTCCTCCACC CCAGCGGTCG CCTCAGCGGG CTTGAGCGCG CGCGCCGCGC GTACCTGGGA CCTGATCAAC AAGTCGGGCA TCGTGATGGT GTTCGTGATT CTGTTCGCGG CTTTGTCGTT CACCGTGCCG GATTTTTTAA GCTCGCGAAA CATCCAGGGC TTGCTGCTCT CCGTCACGCT GATCGGCTCC ATCTCCGTGA CGATGATGTT CGTTCTCGCG CTCGGCGAAG TGGATTTGTC GGTGGCGTCG ATCGTCGCGT TCGCGGGCGT GGTGGCGTCC ACCTTGATCA CCGCGACGCA TAGCGTGATC CTCGGCGTCG CGGCCGGCGT GCTTGCGGGC GGCGCGGTTG GGCTCGTCAA CGGTGTGCTG GTTGCGCGCT ACAAAATCAA TTCGCTGATC GTCACGCTGG CCATGATGGA GGTCGTGCGC GGCCTCGCCT ACATCACCTC GAACGGCGAC GCCGTGATGA TTTCCGAAGA ACGTTTCTTC GACCTCGGCG GCGGCGCGTT CCTCGGCATT TCGTATCCGA TCTGGAGCAA CATCATTGGC TTCGTGCTGT TCGGCTTTTT GCTGAAGAAA ACCGTGTTCG GCAAGAACGT GCTGGCCGTC GGCGGCAATA GCGAGGCTGC GTTGCTGGCG GGCTTGCCGG TGACGCGGAT CAAGATCACA GTGTTCGTAT TGCAGGGCCT CGTCACCGGA TTCGCAGGCG TGATGCTTGC GTCACGTATG AGTCTGGGCG ATCCGAAGAC CTCGGTCGGC CTCGAACTCG GCGTGATTTC CGCATGCGTG CTCGGCGGCG TCTCGCTCAC GGGCGGCGTC GCGACGATTT CCGGTGTGCT GGTCGGCGTG CTGATCATGG GCTCGGTGCA GGACGCCATG AGCCTGCTCA ATGTACCGAC CTTTTACCAA TACCTTATTC GCGGCGGGAT CCTGCTGCTA GCGGTGCTGT TCGATCAGTT CCGCCGTAGC AAGCGCGTGC ACTGA
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Protein sequence | MQTPSTDSST PAVASAGLSA RAARTWDLIN KSGIVMVFVI LFAALSFTVP DFLSSRNIQG LLLSVTLIGS ISVTMMFVLA LGEVDLSVAS IVAFAGVVAS TLITATHSVI LGVAAGVLAG GAVGLVNGVL VARYKINSLI VTLAMMEVVR GLAYITSNGD AVMISEERFF DLGGGAFLGI SYPIWSNIIG FVLFGFLLKK TVFGKNVLAV GGNSEAALLA GLPVTRIKIT VFVLQGLVTG FAGVMLASRM SLGDPKTSVG LELGVISACV LGGVSLTGGV ATISGVLVGV LIMGSVQDAM SLLNVPTFYQ YLIRGGILLL AVLFDQFRRS KRVH
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