Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3857 |
Symbol | |
ID | 6280875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4312582 |
End bp | 4314108 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642623444 |
Product | Integrase catalytic region |
Protein accession | YP_001897469 |
Protein GI | 187925827 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACCAAT ATCGACAGGT TCTGGTGCGA ATGCGCCAGG GTGACTCCGA CCGGGATATC GACCGGTCGA AGATCATGGG CCGTAAGAAG CTGGCAGCCG TGCGTGAGAT CGCAACCGAA CGCGGGTGGC TTTCTCCGGG CAACGCTCTG CCGGATGACA CGCAGCTCGC TACAGCGTTT AGTCGCAAGG AATTCCTGCC AGCGAGCTGT ATCTCGTCAG CCGAACCATG GCGCGAGCAG ATTGCACAGT GGCACGACGC GGGCGTGCCC GGCACGACGA TTCACGGCGC GCTGGTGCGC AACCACGGCT ACGAAGGAAG CTACTCATCC GTATACAGGC TGCTTCAGCA GTTGAAGGCG GAGCTCACGC CGGACGTACC AATGCGGCTG GAGTTCAAAC CTGCCGACGC CGCACAGGTT GATTTCGGCG CAGGTCCGAC CATCACCGAC GCGCATACCG GCGAGATCCA CAAGACGTGG TTCTTCGTGA TGACGCTGTG CTGGTCACGG CATCAGTACG TTGAATTTGT CCGCGACCAG AGTGTCGACA CATGGTTACT GTGTCATCGC CATGCCTTCG AGTGGTTCAA CGGCGTGGTC GCACGCGTCA TCATCGACAA TCCCAAGTGT GCCATCGTCA AGGCCTGTAT CTACGAACCC GAAGTCCAGC GGGCCTACGC GCAATGCGCC GAAGGGTATT CGTTCAAGGT CGATCCTTGT CCGCCGAGGG ACCCGGCTAA AAAAGGAATT GTCGAATCGG GCGTCAAATA CGTGAAGTCG AGCTTCCTTC CTCTTCGCGA ATTCCGTGAT CTTGACGACG CCAACCGGCA AGCGCAAGCC TGGGTGATGC AGGAGGCCAG TACCCGCACG CATGGCACGA CGCGCGAGGT GCCGCTCAAG CGTTTCGAAG ATGTCGAACA GGCGCTGTTG CTGCCGCTTC CCGATGTGCA GCCCGAGCTG GCAACCTGGG CGCGCGTGAA GGTCCATCGC GACGCCCATG TGCAATTCCA GCGCGCCTAC TATTCCGTGC CGTTCCGGCT TGCCGGTAAG GATCTGTGGC TCAAGGCAAC CGCCACCATG GTGCAGCTCT ACTACGAGCA CGAACTGTCG GCATCGCATG TCCGGCAGAC TGCGCCGGGA ACGCGTAGCA CGGTGGCCGA TCACATGCCG CCAGCCGCAC AGGCCTGGCA ACTGCACGAC ACCCAATGGT GCCTCAGAGA AGCGCAGCGT ATTGGGCCTT CCTGCCACGC GCTTGTTCAC GCACTCTTCG GCGATCAGGT TCTCATCAAG CTGCGCGCCG TACAGGGCGT GCTGCGCTTC GCCCAGCAGT TCGGCGCGTC TCGCCTGGAG GCGGCCTGCC GTCGCGCGAA TCATTTCGGC ACGCCAAGCT ACAAAGCCGT CAAGCTGATC CTGCAGAAAG GCCTCGACCA GAGCTGGCTG TCGACCGAAC CCGCTGAATC GAGCGCGACC ACCTACACCC ACGGCGGGCG CTTCTGCCGC GATACCCAGA CCCTCCTGAT CCATTGA
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Protein sequence | MYQYRQVLVR MRQGDSDRDI DRSKIMGRKK LAAVREIATE RGWLSPGNAL PDDTQLATAF SRKEFLPASC ISSAEPWREQ IAQWHDAGVP GTTIHGALVR NHGYEGSYSS VYRLLQQLKA ELTPDVPMRL EFKPADAAQV DFGAGPTITD AHTGEIHKTW FFVMTLCWSR HQYVEFVRDQ SVDTWLLCHR HAFEWFNGVV ARVIIDNPKC AIVKACIYEP EVQRAYAQCA EGYSFKVDPC PPRDPAKKGI VESGVKYVKS SFLPLREFRD LDDANRQAQA WVMQEASTRT HGTTREVPLK RFEDVEQALL LPLPDVQPEL ATWARVKVHR DAHVQFQRAY YSVPFRLAGK DLWLKATATM VQLYYEHELS ASHVRQTAPG TRSTVADHMP PAAQAWQLHD TQWCLREAQR IGPSCHALVH ALFGDQVLIK LRAVQGVLRF AQQFGASRLE AACRRANHFG TPSYKAVKLI LQKGLDQSWL STEPAESSAT TYTHGGRFCR DTQTLLIH
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