Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3750 |
Symbol | dppF |
ID | 6282016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4197633 |
End bp | 4198652 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623337 |
Product | dipeptide transporter ATP-binding subunit |
Protein accession | YP_001897362 |
Protein GI | 187925720 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.765741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAG TACTCGAAAC GCGGCGCCAG TCCGACCATG CGGGCGACCA CGTGCTGGTC GCGGAGCAAT TGGCGCGCTA CTACACGGTC AAGCGCGGCA TGTTCGCGTC CGGCACGGTG AAGGCGCTCA ACGGAGTCTC GTTCGCGCTC GAACGCGGCA AGACGCTGGC AGTGGTTGGC GAATCCGGCT GTGGCAAATC GACGCTCGCG CGTCAATTGA CCATGATCGA AGCGCCCTCC GCGGGCCGTC TGCTGATCGA CGGTGAAGAC GTGGCCGGCG CCGATCACGC GAAGATCGCA GCGCTGCGCC GGCGCGTGCA GATGGTGTTC CAGAACCCGT TTGCCTCGCT CAATCCGCGC AAGACCGTCG AGCAGACGCT CGGCGAACCG CTCGCAATCA ACACGCAACT GAGCGCGACC GAGCGCGCCG AACGGATCGC GCAGATGATG CGCACCGTCG GCCTGCGTCC GGAACATGCG AAGCGCTATC CGCATATGTT CTCCGGCGGT CAGCGGCAAC GTGTGGCGAT TGCGCGCGCG ATGATTCTCG ACCCGCAGAT CGTGGTCGCC GACGAACCCG TATCGGCGCT CGACGTGTCG ATCCAGGCGC AGATTCTGAA TCTGTTCATG GATCTGCAGG AACAGTTCAA GACCAGCTAC GTGTTCATCT CGCACAACCT CTCGGTGGTG GAGCATATCG CCGACGACGT GATGGTGATG TACTTCGGCG GCGTGGCGGA GCTCGGCGAC AAGAAGCGGA TTTTCTCGAA CCCGCGTCAT CCGTACACGC GCGCGCTGAT GTCGGCCACG CCGTCGATCT TCGAGGCGGA TCGCACGATC AAGATCAAGC TGCAAGGCGA AATGCCTTCG CCGCTGAATC CGCCGTCGGG TTGCACGTTT CATCAGCGCT GCCCGTACGT GATCGACCGC TGCCGCAGCG AAGAACCGAA GCTGCGTGAA GTGGATGGCC GCCAGGTGTC GTGTCACCGC GCCGAGGAGG TGGGGGACGT GGATGCCTGA
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Protein sequence | MNAVLETRRQ SDHAGDHVLV AEQLARYYTV KRGMFASGTV KALNGVSFAL ERGKTLAVVG ESGCGKSTLA RQLTMIEAPS AGRLLIDGED VAGADHAKIA ALRRRVQMVF QNPFASLNPR KTVEQTLGEP LAINTQLSAT ERAERIAQMM RTVGLRPEHA KRYPHMFSGG QRQRVAIARA MILDPQIVVA DEPVSALDVS IQAQILNLFM DLQEQFKTSY VFISHNLSVV EHIADDVMVM YFGGVAELGD KKRIFSNPRH PYTRALMSAT PSIFEADRTI KIKLQGEMPS PLNPPSGCTF HQRCPYVIDR CRSEEPKLRE VDGRQVSCHR AEEVGDVDA
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