| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3462 |
|---|
| Symbol | |
|---|
| ID | 6280853 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3895678 |
|---|
| End bp | 3896232 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642623036 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001897076 |
|---|
| Protein GI | 187925434 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000327193 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.000142313 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCATCCTG CGCGGTACAA TCGCGGCGTG AACGCGCATA GTGTGCGGGC ACGCCATTAC
CCATCGAACA TGAGCCGTTT TCCTTCCTTT TCAAGGCCGC CGCCCCAGCA GTTCAAGGCG
CGCCGCCCGC AGCCGGTCGC CGAGGTGCTC AATCGCACAG ACGCGTTCGC GGCCCTGCGC
GCGGGCGTCG AGCAGATTGC GGCGCTGGAG AAGGATCTGC GCGCGCTACT GCCCGACTAT
CTGGCGACGA GCGTCGAACC CAGCTTTATC AAGGAAGGCG TGCTGGCCCT GTTCGCCGGC
CATAACGCGC TGGCAGCGCG GCTGCGGCAT CTGGAGCCAC GGCTGCTGGC GGATCTGCAG
CAGCGCGGCT GGCCCGTGAA TTCCCTGCGG ATTCGCGTGC GGCCGCAGGC GGTCAAGGAA
CCGCCGCCGG TCAAACAGGC GCGCATGACG CCAGCTGGCG CCGATGCGCT CCACGCGCTG
AGCGAATCGC TGGCGCCCTC GCCTTTGCAG GAAGCGCTGG CGAAAATGGC GGCCCGGCAT
CGGAGAAATC GCTAG
|
|---|
| Protein sequence | MHPARYNRGV NAHSVRARHY PSNMSRFPSF SRPPPQQFKA RRPQPVAEVL NRTDAFAALR
AGVEQIAALE KDLRALLPDY LATSVEPSFI KEGVLALFAG HNALAARLRH LEPRLLADLQ
QRGWPVNSLR IRVRPQAVKE PPPVKQARMT PAGADALHAL SESLAPSPLQ EALAKMAARH
RRNR
|
|---|
| |