| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3231 |
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| Symbol | |
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| ID | 6280899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3639056 |
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| End bp | 3639793 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642622804 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001896846 |
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| Protein GI | 187925204 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.304941 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCTA CTTTCGATTT TTCTGGTCGG TCGATTCTTG TGACGGGTGC CTCGAGCGGG
ATTGGGCGCG CGACGGTCGA GGCATTGTGT GCGTCGGGCG CGAATGTGGT GGCTGCCGCG
CGCAATGTGA GTGAGCTTGC GCGGTTAGCG GAGGAAACGG GCTGCGAGCC TTTGGTGCTT
GATGTGAGCG ATGAAGCGGC TATCGATGAC GCGTTAGGTT CGCTCGATGT GTTCGATGGG
CTCGTGAATT GCGCGGGAAT TGCGTTGCTT GAACGTGCTG TGGACACGAC CGGTGCCAGT
TTTGATCGGG TGATGGCGGT GAATGCGCGG GGCGCCGTGC TGGTGGCCAA GCATGTGGCG
CGGGGGATGA TCGATGCTCA ACGCGGTGGC AGTATTGTTA ATGTTTCCAG TCAGGCCGCG
CTTGTCGCGT TGGATGATCA TTTGAGTTAT TCGGCTTCCA AGGCTGCGCT CGATGCTGTT
ACACGGGCTC TGTGTGTTGA GTTGGGGCCG TTCGGGATTC GGGTTAATAG CGTGAATCCT
ACGGTTACGT TGACGCCTAT GGCGGTGCTG GCCTGGAGTG ATCCGGTTAA GCGGGATCCC
GCGCTTAAGG CTATTCCGTT GGGGAGGTTT GCTGAGTCTG CTGAGGTTGC GGCGCCGATT
TTGTTTTTGT TGAGTGGGGG GGCTTCTATG ATTAGTGGGG TTTGTTTGGC TGTTGATGGG
GGGTATACGG CTAGGTGA
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| Protein sequence | MNATFDFSGR SILVTGASSG IGRATVEALC ASGANVVAAA RNVSELARLA EETGCEPLVL
DVSDEAAIDD ALGSLDVFDG LVNCAGIALL ERAVDTTGAS FDRVMAVNAR GAVLVAKHVA
RGMIDAQRGG SIVNVSSQAA LVALDDHLSY SASKAALDAV TRALCVELGP FGIRVNSVNP
TVTLTPMAVL AWSDPVKRDP ALKAIPLGRF AESAEVAAPI LFLLSGGASM ISGVCLAVDG
GYTAR
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