| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3073 |
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| Symbol | |
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| ID | 6280741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3464908 |
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| End bp | 3467760 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622642 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001896689 |
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| Protein GI | 187925047 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0673699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGGCG GTCATTTCTG GCTTGACGGG TACACGCGTC TCGATCTCGC CGCGATGCAT
CTCCTCGCGT TCACTGGCAT CATCTTCAAT TCATCGTTGG GCATGCTCCG TGCAACTTCA
CATGCGGTTG GCCGTCCCAT CGGCCACGCT TATTCGCTGG TCATCGATAT GGACGCCATC
CGCAACAACG CTCCTTCAAC GCCGCCGTCC GACGCACCCG CCTTCACCGG CTTCGTGCGC
GTGCGCGGCG CTCGCGAACA CAATCTGAAA AACATCGACG TGCAGATTCC GCGAGATGCG
CTGGTCGTCT TCACCGGAGT GTCCGGCTCG GGCAAATCGT CGCTGGCATT CGGCACGTTG
TACGCCGAAG CGCAGCGGCG CTATTTCGAA TCGGTCGCGC CATATGCCCG ACGCCTGATC
GAGCAGGTCG GCGTACCCGA AGTGGACGCC ATCGAAGGCC TGCCGCCCGC GGTCGCGTTG
CAACAGCAGC GCGGCACGCC GAGCGCGCGC TCGTCGGTCG GCAGCGTGAC CACGCTGTCG
AGTCTCGTAC GCATGCTCTA TTCGCGCACC GGCGACTATC CGCCGAAGCA ACCCATGCTG
TTCGCCGAGG ATTTCTCGCC GAACACGGTG CAAGGCGCCT GCCCGACTTG TCACGGACTC
GGTCGCGTGT ACGAGGTCAC GGAAAAATCC ATGGTGCCGG ACGACTCGCT GACCATTCGC
GAGCGCGCAA TCGCCGCGTG GCCGCCCGCG TGGCACGGAC AGAATCTGCG CGACATTCTG
GTGACGCTGG GCTACGACGT CGATAAACCG TGGCGCGATT TGCCGAAGAA AGACCGCGAC
TGGATTCTGT TCACCGACGA ACAGCCGACC GTGCCGGTCT ATGCCGGCCT CACGCCGAAA
GAAACCCGCG CCGCGCTCAG GCGCAAGGAC GAACCGAGCT ATCAGGGCAC CTTCACCGGT
GCGCGCCGCT ACGTGCTGCA CACGTTTGCG AACACGCAAA GCGCGTTGAT GAAAAAACGC
GTGTCGCGAT TCATGATCGG CAGCGTCTGT CCGACCTGTC ATGGTAAGCG GCTCAAGAAG
GAAGCGCTGT CGGTGAAGTT CGCCGGGCTC GATATCGGCG AGTTTGCCCA GTTGCCGCTA
GCGCGGCTCG CCGAGATGCT CGCACCGATC GCGCGTGGCG AATGGCCCGA GCCGGATGTC
GGACATTCGG GCAAAGACCC TGGCAAAGGC AGCGTGCTCA GCAAGAACGC CATGCGCGAT
GCCGTCGATA AACGGGTCGC CGCGGGCGGT TCCGCGCACA AAGCCGCGCC CGATGTTCGG
CGCACACCTA ACCTGTCCGA GGAAAAACGC GTCGCCGCGC AGCGCATTGC CGCCGAATTG
CTCGAACGCC TGACCACTCT GGTCGATCTG GGTCTGGGCT ATCTTGCGCT GGAGCGCAGC
ACGCCCACGC TGTCATCCGG CGAATTGCAG CGCTTGCGAC TCGCTACGCA ATTGTCCTCG
CAGTTGTTCG GCGTCGTGTA TGTACTCGAC GAGCCATCGG CCGGCCTGCA TCCCGCGGAT
GGCGAAGCGC TCTTCAGCGC GTTGCAGAGT CTGAAGGCCG CGGGCAATTC GTTGTTCGTC
GTCGAACACG ATTTGCAGAT GATGCGGCGC GCCGACTGGC TCGTCGACGT CGGTCCCGCA
GCCGGCGAAG CCGGTGGCCA TGTGGTTTAT AGCGGGCCGC CCGCCGGCCT CGCGAAGGTC
GAAGCGTCGC ACACGCGCCG GCATCTGTTC GCGCCGCCCG CGCCCGTCGC GCGCGCGACG
CGCGAACCGG CCGGCTGGCT GCGGCTCGCC GGCATCACGC GCAACAATCT GCACGGGCTG
GACGCCGCGT TTCCGCTCGG TTGCCTGACC GCCGTCACCG GCGTGTCGGG CTCGGGCAAA
TCGAGTCTCG TGAGCCAGGC GCTGCCGGAA CTGGTCGCCA GCCACCTTGG ACGCGTCTTC
GAAAACCCCG ACGACGACGA ACAAGACCCG TTGCTCGCCA CCGCGAGTGC GCCGACCAGC
GGCCGCATCG CTGAAGGCAT GGACGCGCTG CGGCGGCTCG TGCGCGTCGA TCAGAAACCG
ATCGGGCGCA CGCCGCGTTC CAACCTGGCG ACGTACACGG GCCTCTTCGA CCACGTGCGC
AAGCTGTTCG CCGACACGCC GCTCGCCCGC AAACGCCGCT ACGGCGCGGG CCGTTTCTCG
TTCAACGTGG CGCAAGGCCG TTGCCCGACG TGCGAAGGTG AAGGCTTCGT CAGCGTCGAG
CTACTGTTCC TGCCGAGCGT CTATGCGCCC TGCTCGACCT GTCACGGCAC GCGCTACAAC
ACGCAGACGT TGGAAGTCAC ATGGCGCGAT AAAAACATCG CCGAGGTGCT CGGCCTGACA
GTCGACGCCG CCTGCGATTT CTTCGCCGAC GAAGCCAGCG TGATGCGCGC GCTGAAAGTG
CTGCGCGACA TCGGCCTCGG CTATCTGCGG CTCGGTCAGC CGGCCACGGA ATTGTCCGGC
GGCGAAGCTC AGCGCATCAA GCTCGCCACG GAACTGCAAC GCGCACAACG CGGCGACACG
CTATATATCC TCGACGAACC GACCACCGGC CTGCATCCCG CCGACGTCGA CCGGCTGATG
GTGCAACTCC AAGGACTCGT GGATGCCGGC AATACCGTCG TCGTGGTGGA ACACGACATG
CGGGTGGCGT CGCAAAGCGA CTGGGTCGTC GACGTCGGTC CGGGCGCCGG CGATGCCGGC
GGCAAGATCG TGGCGAGCGG CACGCCGGCT GAGATTCTGC GCGTGAAGGA AAGCCGCACC
GCCGAGTATT TGCGGCAGCA CCTCGCAGCG TGA
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| Protein sequence | MIGGHFWLDG YTRLDLAAMH LLAFTGIIFN SSLGMLRATS HAVGRPIGHA YSLVIDMDAI
RNNAPSTPPS DAPAFTGFVR VRGAREHNLK NIDVQIPRDA LVVFTGVSGS GKSSLAFGTL
YAEAQRRYFE SVAPYARRLI EQVGVPEVDA IEGLPPAVAL QQQRGTPSAR SSVGSVTTLS
SLVRMLYSRT GDYPPKQPML FAEDFSPNTV QGACPTCHGL GRVYEVTEKS MVPDDSLTIR
ERAIAAWPPA WHGQNLRDIL VTLGYDVDKP WRDLPKKDRD WILFTDEQPT VPVYAGLTPK
ETRAALRRKD EPSYQGTFTG ARRYVLHTFA NTQSALMKKR VSRFMIGSVC PTCHGKRLKK
EALSVKFAGL DIGEFAQLPL ARLAEMLAPI ARGEWPEPDV GHSGKDPGKG SVLSKNAMRD
AVDKRVAAGG SAHKAAPDVR RTPNLSEEKR VAAQRIAAEL LERLTTLVDL GLGYLALERS
TPTLSSGELQ RLRLATQLSS QLFGVVYVLD EPSAGLHPAD GEALFSALQS LKAAGNSLFV
VEHDLQMMRR ADWLVDVGPA AGEAGGHVVY SGPPAGLAKV EASHTRRHLF APPAPVARAT
REPAGWLRLA GITRNNLHGL DAAFPLGCLT AVTGVSGSGK SSLVSQALPE LVASHLGRVF
ENPDDDEQDP LLATASAPTS GRIAEGMDAL RRLVRVDQKP IGRTPRSNLA TYTGLFDHVR
KLFADTPLAR KRRYGAGRFS FNVAQGRCPT CEGEGFVSVE LLFLPSVYAP CSTCHGTRYN
TQTLEVTWRD KNIAEVLGLT VDAACDFFAD EASVMRALKV LRDIGLGYLR LGQPATELSG
GEAQRIKLAT ELQRAQRGDT LYILDEPTTG LHPADVDRLM VQLQGLVDAG NTVVVVEHDM
RVASQSDWVV DVGPGAGDAG GKIVASGTPA EILRVKESRT AEYLRQHLAA
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