Gene Bphyt_3061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3061 
Symbol 
ID6281809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand- 
Start bp3455213 
End bp3455875 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content67% 
IMG OID642622629 
Producthypothetical protein 
Protein accessionYP_001896677 
Protein GI187925035 
COG category[S] Function unknown 
COG ID[COG4648] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.458939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.850708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG TGCGCTCGCG AACGCAAGCG GCGGCGGACC GGGTTGCCGA TGCCTCGCCC 
GGCACTGAGC GCCATCTGGG CAAAACCGTC GTGCAGGTGC TGTTGAAGCT CGCGTACCCC 
GCGCTGATTC TGTGTGCCTG GAAATGGGAC ACGCCGCGCT ACGTCGGCTG CATGCTGTTC 
GCGATCCTGT GGCTGCAGCG CTGGGCCGGC AGCGGGCCGG TCGCGACCTC GCTGCGGCGG 
CTCTCCTCGA TCGACTGGAC CGTGGTCGGT TTGCTCAGCT GCGCGTCGGC GGCGATCGTC 
TTGACCAATA GCGAGCTGCT GTTGCGTCTT TATCCGTCGC TCGTCAATCT GGGCTTGCTG 
ATCGCGTTCG GCGCGACGCT CGTGCGTGGG CCGTCGATGA TCGAAAAATT CGCGCGTCTC 
GGCAATCCGA ATCTGCCGCC GGGCGCGGTG CGCCATACGC TGCGCGTGAC CCAGGTGTGG 
TGCGCGTTCT TCGCGCTGAA CGGCGTGTTT TCCGCGTACA CGGCGGTGTA CTGGAGCCGG 
GCGAGCTGGT CGCTCTACAA CGGCGCGATC GCCTATGTGC TGATCGGCGT GCTGCTGGTG 
GCTGAGGTCA TCTGGCGTTA TCTGGTCGTG CTGCCGCGCG CGGCACGCTC GGAGGCGGCA 
TGA
 
Protein sequence
MSAVRSRTQA AADRVADASP GTERHLGKTV VQVLLKLAYP ALILCAWKWD TPRYVGCMLF 
AILWLQRWAG SGPVATSLRR LSSIDWTVVG LLSCASAAIV LTNSELLLRL YPSLVNLGLL 
IAFGATLVRG PSMIEKFARL GNPNLPPGAV RHTLRVTQVW CAFFALNGVF SAYTAVYWSR 
ASWSLYNGAI AYVLIGVLLV AEVIWRYLVV LPRAARSEAA