| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_2352 |
|---|
| Symbol | |
|---|
| ID | 6281337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 2646742 |
|---|
| End bp | 2647659 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642621908 |
|---|
| Product | ribonuclease BN |
|---|
| Protein accession | YP_001895974 |
|---|
| Protein GI | 187924332 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1295] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATACC AGCAACGCAA CGCAGGCGCG CGATCCAGCC GATCAGGCGG CGCAGTGGCC
GTCATGAAGG ACGCCGTCGA GCGATTTTCG TCGGACCGGT GCGCGATGAT GGGCGCGAGC
ATCGGCTTCT ACTCCGCGTT CTCGCTGGCT CCGACTTTAC TGATCGTCCT CGCGATTACG
GGCTGGTTCG TCGGCCGCGA CATCGCGCAG GGGCGATTTT TTGGTCAGAT CAGGCAGTTG
CTCGGCAACG ACGCCGCCAC CGCGATGCAG GCTGTCGTCG AACACGCGCA TCGTTCGAAT
GGCAGCGGCA TGGCTGCGGC GTTCTCTGTC GTGCTGCTTC TCGTCGGGGC TTCGGCGACA
TTTTCCTGCC TGAATACAGC ACTCGATGTC GTCTTTGCCG CGAAATCACC TAAAGGCCTT
GCCGGTCTCG CGTGGGTGAT CCGGGCGCGG CTCGTCTCGC TCGGCCTGCT TATGGGACTC
AGTTTTCTGC TGGTGGTCTC GCTGGTCCTC GACGCCGCAT TACAGACGGC CGGCAGTGCC
GTTTTCGGCA ACTCGACGCT CAGCGTCGTT GCCGACGTCG CGCAATCTGT TTTCGGCCTC
GTGATACTGA CTTTCGGACT CGGTGCGCTG ATCAAGTGGC TCCCCGACAA GCGGGTCAAC
TTTCGTTCCG CGTTGATCGG CGGCGCCGTC GCGGCGTTGC TGTTTACCGT GGGCAGGCAC
CTGTTCGGTT TCTATCTCGC GCATGCGGGA ACGGCGGGCG CATTCGGCGC GGCAGGCTCA
CTCGCTGTGT TGATGATGTG GCTATATTTT TGCGCCATCG TTTTTCTTTT CGGCGCGGAG
GTCACGGCTT CGCTGTGTCA AACGCCGAAA GACGGCAATG CGGCGGACGT CAAGGCCCGC
TTGAACGCTG CACATTGA
|
|---|
| Protein sequence | MEYQQRNAGA RSSRSGGAVA VMKDAVERFS SDRCAMMGAS IGFYSAFSLA PTLLIVLAIT
GWFVGRDIAQ GRFFGQIRQL LGNDAATAMQ AVVEHAHRSN GSGMAAAFSV VLLLVGASAT
FSCLNTALDV VFAAKSPKGL AGLAWVIRAR LVSLGLLMGL SFLLVVSLVL DAALQTAGSA
VFGNSTLSVV ADVAQSVFGL VILTFGLGAL IKWLPDKRVN FRSALIGGAV AALLFTVGRH
LFGFYLAHAG TAGAFGAAGS LAVLMMWLYF CAIVFLFGAE VTASLCQTPK DGNAADVKAR
LNAAH
|
|---|
| |