Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1969 |
Symbol | |
ID | 6281184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2219973 |
End bp | 2221439 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642621535 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001895601 |
Protein GI | 187923959 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAAG GCATTCTCAA GAACGTAGCG ATCAATTTCT TCGGGCTGGT GCTGCCGACC TTCGTCTCGC TCGTGACCGT GCCGTCGTAT ATCAAGCTGC TCGGCGTCGA GCGCTACGGC GTGATCAGCC TCGTGTGGAC GCTGATCGGC TACTTCGGCA TTCTCGATCT CGGCATGAGC ATGGCCGCGC AGAATCACAT CTCGAAGGCG CGCGCATCCG GCGATAAGGA AGAGAGCGCG CGCGTGTTCT GGAGCGCGAC GTGGCTCAAT CTCGCGACCG GCGTGATCGG CGGATTGATC ATCTATTTCG GCGCGTTTCT CTACACCGCG TATTTCACCA AGGTGTCGCC CGAGTTGCAG CACGAGGTGT ATATGGCGCT GCCGTGGCTC GCGGTGGCGA TTCCGATCGC CAACGTCTCG TGGGTGTTCG CGGGCGCGAT CAACGGCGCG GAGCGCTTTG GCGTCTACAA CACCAATCAG ACCATCGGCA CGTTTCTGTT CCAGTTGCTG CCGCTCGGCG CCGCGCTGTG GATGGGCGCG ACCTTGCAGA ACGTGCTGGC CGCAGCGGTG TTCGCGCGGA TCGTGGCCGC GCTGCTGCTG GGGCGCTCGG CGCTGAAAGT GCTGGAAATC CGCCGCATTC TGCCGCCGCA ATTCGGCGTG GCGAAGGGGC TGTTCAATTT CGGCGGCTGG ATGCTGATTG CGAGCGTCAC CACCATGATC GCCGACTCGC TCGACCGCGT GATGCTCGGC ACGAGCCTCG GCGCGCGTTT CGTCACGTAT TACACGGTGC CGCAGAACCT TGTCACGCGA TTGAACATCG TGCCGACGGC GCTGGTGCGC ACATTGTTTC CGCGGCTCTC CGCAGTGGGA CGCGCCGACG CCGACACCAT CACGCAGCAA TCGCTCGAAT TTCTCAACGG CGTGTTCACG CCGGTCGCGC TGGTCGCGAT GCTGGTGCTC GAACCGTTTC TGCATCTGTG GGTGGGCAAT GAGATCGCCA CGGTGGCCGC ACCGGTGGGC CGCATCATGA TCGTCGCCGT GTGGCTGGTC GGGCAGGCGA ACGTCACGCG GATTCTGATC CAGTCGCAGG TCAATCCCGC CACGGCCGCG CGCGTCGGTT TGTTCGAATT GCCCTTGTTT GCAGGGGCAT TGTGGTTCGG CATCACGCGC TTCGGCCTGA CCGGCGCGGC GGTGGCCGTG GCTGGCCGCG CGCTGTTCGA CTACGCGGTG CTGCTGCGAC TGTCGGCGAT CCGCGCGAAG CAGATTGCGC TCGACATGCT CGCTCACCTT GCTTTCCTGC TGGCCAGCCT GTGGCTCGCC AGCTTCCTGC CGGGTCTCGC AATGGCGATT GTTGCCGGCG TATTGATGGT AGGCGCGAAT GTCGCCTGGT CGATCACGAT GACACCCGCC TTGCGCGATC TTGCGCGTTC ACTGCTGTTG CGACTGAATC CGAGGAAAAG CGCATGA
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Protein sequence | MDKGILKNVA INFFGLVLPT FVSLVTVPSY IKLLGVERYG VISLVWTLIG YFGILDLGMS MAAQNHISKA RASGDKEESA RVFWSATWLN LATGVIGGLI IYFGAFLYTA YFTKVSPELQ HEVYMALPWL AVAIPIANVS WVFAGAINGA ERFGVYNTNQ TIGTFLFQLL PLGAALWMGA TLQNVLAAAV FARIVAALLL GRSALKVLEI RRILPPQFGV AKGLFNFGGW MLIASVTTMI ADSLDRVMLG TSLGARFVTY YTVPQNLVTR LNIVPTALVR TLFPRLSAVG RADADTITQQ SLEFLNGVFT PVALVAMLVL EPFLHLWVGN EIATVAAPVG RIMIVAVWLV GQANVTRILI QSQVNPATAA RVGLFELPLF AGALWFGITR FGLTGAAVAV AGRALFDYAV LLRLSAIRAK QIALDMLAHL AFLLASLWLA SFLPGLAMAI VAGVLMVGAN VAWSITMTPA LRDLARSLLL RLNPRKSA
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