| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1872 |
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| Symbol | |
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| ID | 6284113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 2102266 |
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| End bp | 2103300 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642621435 |
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| Product | Pyridoxal-5'-phosphate-dependent protein beta subunit |
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| Protein accession | YP_001895504 |
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| Protein GI | 187923862 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0095677 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0115658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACCG CCACGCCGCA ACACACCGAC CATACGATCG ACGGCGAGCC GATCCCAACG
CTCGACGACA TCGCCGCACA GCACTTTGCG TTGACGCCGT GGGTGGCGCG AACGCCGGTG
TTCGACCGGG TGGACTTTCC TTCGCTGGAA GGCACGGTGG TGAACTTCAA GTTCGAACTG
TTGCAAGCGG GTGGCAGCTT CAAGGCGCGC GGCGCGTTCA CCAACCTGCT CGCACTGGAC
GAAGCGCAGC GCAGCGCGGG CGTCACGTGC GTGTCGGGCG GCAATCATGC GGTGGCGGTC
GCGTATGCGG CCATGCGCCT TGGCGTCAGC GCCAAGGTCG TGCTGTTTCG CGCGGCCAAT
CCGGCACGGG TAGCACTGTG CCGGCAATAT CGCGCCGAGA TCGTGTTCGC CGAAGACATT
GCCGAAGCAT TCGAACTGGT GCGCCGGATC GAGGCCGAAG AAGGCCGCTA TTTCGTGCAT
CCGTTCAACG GCTATCGCAC GGTGCTGGGT TCGGCCACGC TCGGCTACGA GTGGGCCACG
CAAACGCCGG ATCTCGAAGC GGTGATCTTG CCGATCGGCG GCGGCGGCCT CGCGGCCGGC
GTCGCGACCG CCATGCGGCT CGCGAATCCG AACGTGCACG TGTATGGCGT GGAACCTGAA
GGCGCGGACG TGATGGGCAA GAGTTTCGCC GCCAATCACA CGGTCAAGAT GCGCCAGATG
CGCGGCATTG CCGACTCGCT CATGTCGCCG CATACCGAGC AATACAGCTA CGAATTGTGC
CGCCGTCATA TCGATCAGCT CGTCACCGTG TCCGACGACC AGTTGCGTGC GGCCATGCTG
ACTTTGTTCG GACAACTGAA GCTCGCTGTC GAGCCCGCCT GCGCCGCGGC TACCGCAGGC
TTGCTCGGCC CGCTGCGCGA ACAGTTGCAA GGCAAGCGCG TCGGCGTTCT GCTGTGCGGC
ACCAATACCG ATCCGGTCAC ATTTGCCGCG CATATCGAAC GCGCTCGGCA TAGCGAGTCA
CAGTTTCCTC AATAA
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| Protein sequence | MSTATPQHTD HTIDGEPIPT LDDIAAQHFA LTPWVARTPV FDRVDFPSLE GTVVNFKFEL
LQAGGSFKAR GAFTNLLALD EAQRSAGVTC VSGGNHAVAV AYAAMRLGVS AKVVLFRAAN
PARVALCRQY RAEIVFAEDI AEAFELVRRI EAEEGRYFVH PFNGYRTVLG SATLGYEWAT
QTPDLEAVIL PIGGGGLAAG VATAMRLANP NVHVYGVEPE GADVMGKSFA ANHTVKMRQM
RGIADSLMSP HTEQYSYELC RRHIDQLVTV SDDQLRAAML TLFGQLKLAV EPACAAATAG
LLGPLREQLQ GKRVGVLLCG TNTDPVTFAA HIERARHSES QFPQ
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