Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_1852 |
Symbol | |
ID | 6281879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 2079839 |
End bp | 2081023 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642621415 |
Product | cystathionine beta-lyase |
Protein accession | YP_001895484 |
Protein GI | 187923842 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01324] cystathionine beta-lyase, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.133902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCAAT CCAAACTCCA ACGCGATCTG CAAACCCGCA TCGTGCGTGC CGAGGACCAG CTCACGCCGG GCTTCGAGTC GTTCTCGATG CCGGTCACGC GGGCGTCGAC GGTCGTGTTC CCCGATCTCG CCACCATGCG CGCGCTCGAC TGGAAAAACG ACGCGCAATG GCGCTACGGC CTGCATGCCA CGCCGACTTC GCTCGCGCTG GCGCAGCGCC TTGCCACCAT CGAGGGCGGC AATCACGCGT TGCTGCAGCC GTCCGGGCTG TCGTCGATTT CGAATGTGTA TTTCGGCCTC GTCAAAGCTG GCGACGACGT GCTGATTCCC GATAACGTCT ATTCGCCGAA CCGCGATCAC GGCGACTGGC TGGCGCGCGA TTTCGGTATC ACCGTGCGCT ACTACGATCC GATGATCGGC GCGGGCATGG CCGATCTGAT CCAGCCGAAT ACGCGCCTGA TCTGGCTCGA GGCGCCCGGC TCGGTGACGA TGGAAGTGGC CGACGTGCCT GCCATCACCG CGGCGGCGCG CGCGCGCAAC GTCGTCACGG CGATCGACAA CACGTGGTCG GCGGGGCTCG GTTTCCGGCC GTTCGATCAC GGCGTCGACA TCTCGGTGCA GGCGCTCACC AAGTATCAAT CGGGCGGCGG CGACGTGCTG ATGGGCGCGA CGATCACCGT CGATCGCGAA CTGCATCTGA AGCTGAAGGC GGCGCGCATG CGCATGGGCA TCGGCGTCTC GTCGGACGAC TGCTCGCTGA TTCTGCGCAG CTTGCCGACC ATGCAACTGC GCTTCGAGCA GCATGACCGC TCGGCGCTCG GCCTGGCGAA ATGGCTGAAG ACGCGGCCGG AAATTGCCGC GGTGTTGCAC CCGGCGCTCT CCGACTGTCC GGGGCATGAG TTTTACAAGC GCGACTTCAC GGGCGCGGGC GGGCTTTTCT CCGTCGTGTT CGACGGCCGC TACAGCCCGG CGCAAATCGA TACGTTCTGC GAGTCGCTCG AACTGTTCTC GCTCGGCTGG AGCTGGGGTG GTGCACACAG TCTCGCGATG CCGTACGACG TCGCGTCGAT GCGGACGGCA GGGCAGTGGC CGCACAGCGG GACCTTGGTG CGCTTCTATA TCGGCCTCGA AGCCGAGGCG GATTTGCGTG CCGATATGGA GCAGTCTCTG GCCAGGCTGA GTTAA
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Protein sequence | MTQSKLQRDL QTRIVRAEDQ LTPGFESFSM PVTRASTVVF PDLATMRALD WKNDAQWRYG LHATPTSLAL AQRLATIEGG NHALLQPSGL SSISNVYFGL VKAGDDVLIP DNVYSPNRDH GDWLARDFGI TVRYYDPMIG AGMADLIQPN TRLIWLEAPG SVTMEVADVP AITAAARARN VVTAIDNTWS AGLGFRPFDH GVDISVQALT KYQSGGGDVL MGATITVDRE LHLKLKAARM RMGIGVSSDD CSLILRSLPT MQLRFEQHDR SALGLAKWLK TRPEIAAVLH PALSDCPGHE FYKRDFTGAG GLFSVVFDGR YSPAQIDTFC ESLELFSLGW SWGGAHSLAM PYDVASMRTA GQWPHSGTLV RFYIGLEAEA DLRADMEQSL ARLS
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