| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1421 |
|---|
| Symbol | |
|---|
| ID | 6283022 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 1589578 |
|---|
| End bp | 1590489 |
|---|
| Gene Length | 912 bp |
|---|
| Protein Length | 303 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642620987 |
|---|
| Product | protein of unknown function DUF6 transmembrane |
|---|
| Protein accession | YP_001895060 |
|---|
| Protein GI | 187923418 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAC AAGAACGCCT GCTCATGTTG TCCGATCTGA TGCTGCTCGC CGTCGCCGTC
GTCTGGGGCA CCAGTTACGG CGTGGTCAAA AGCGCGCTGG TGTTCTATCC GGTGCTGGGT
TTGCTTGCGC TGCGCTTTGG CATCACTTTC GTGCTCCTGT CGCCCGCCTT GCGCCACCTG
CGCGCCACCG ACGCCCGCAC GTTGCGCGGC GTGCTGTTCT CCGGCGTGCT GCTGCTCGGT
ATCTTTCTCT GTGAAACCTT CGGCATCCTG ATGACGCGTG CGGCCAACGC CGCGTTTCTG
ATCAGCTTGT GCGTGGTGTT GACGCCGCTC GTCGAATGGT TGCTGCTCAA GCGCAAGCCG
AGCCGCGTCG AATGGGTGGC AGTGGCGCTT TCGCTGCTGG GCGCATGGCT GCTCGCCGGC
GACGGTGAAC TGAGCCTCAA TCCCGGCGAC GCGCTAATTC TGCTCGCCGC GCTGCTGCGC
GCGTTGACGG TGTGTGTGAC CAAACGCGTG ATGCGCGATT CGGCGCTGCC GCCGCTGTCG
GTGACTGTGG TTCAGTCTGG CGTGGTGGCA TTCGGCAGCG CCGCAGCCGC CTGGTTGTTC
GCGCCGCAGC AATGGCAGGC TGTGCCCTCG ATTGCGGGAC ACGCGGCGTT CTGGGGCTAT
GTCGGCTATC TGGTGATCGC GTGCACGCTG TTCGCGTTCT TTGCGCAGAA CTTCGCGATC
AAGCGCAGCA GCCCGACACG CGTCTCGCTG CTGATGGGCA GCGAACCGGC GTTCGGGGCA
TTGTTTGCCT GCATCTGGTT GGGTGAGCGA ATTTCGGTAA GCGCGTGGGT CGGCGGCGCA
TTGATCGTCG CGGCATCGAT TCTGGCGACC GTGCGATGGA CCGCGTTGCG TGTGAGCGCC
GCACAGGCCT GA
|
|---|
| Protein sequence | MSKQERLLML SDLMLLAVAV VWGTSYGVVK SALVFYPVLG LLALRFGITF VLLSPALRHL
RATDARTLRG VLFSGVLLLG IFLCETFGIL MTRAANAAFL ISLCVVLTPL VEWLLLKRKP
SRVEWVAVAL SLLGAWLLAG DGELSLNPGD ALILLAALLR ALTVCVTKRV MRDSALPPLS
VTVVQSGVVA FGSAAAAWLF APQQWQAVPS IAGHAAFWGY VGYLVIACTL FAFFAQNFAI
KRSSPTRVSL LMGSEPAFGA LFACIWLGER ISVSAWVGGA LIVAASILAT VRWTALRVSA
AQA
|
|---|
| |