| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_1418 |
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| Symbol | |
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| ID | 6283102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 1584763 |
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| End bp | 1586781 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642620983 |
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| Product | Na+/solute symporter |
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| Protein accession | YP_001895057 |
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| Protein GI | 187923415 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4147] Predicted symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR03648] probable sodium:solute symporter, VC_2705 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.181341 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCA CGAACCGGCT GATCAGCTCC TACGCCCTTT ACACGCTCGG CTTCCTGCTT
TTCATCTATG TGATGTGGCG CATCGAGCGC ACCACCGGTC CTGGCGTGTG GATCGGCTAT
GTCTTCCTGT TCGTGCCGAT TGCGGTGTAT GCGGTGATCG GCTTGCTGTC GCGCACTTCC
GATCTGGTCG AATATTACGT GGCCGGGCGG CGCGTGCCGT CCGCTTTCAA CGGCATGGCG
ACCGCGGCCG ACTGGCTTTC GGCGGCTTCG TTCATCGGCC TCGCCGGCTC GATCTATGCG
ACCGGATATG ACGGTCTCGC GTATCTGATG GGCTGGACCG GCGGCTATTG TCTGGTCGCG
TTCCTGCTCG CGCCGTATGT CCGCAAGCTC GCGCGCTACA CGATTCCCGA TTTTCTCGGT
ACGCGCTTTT CGAGCAACGC CGTGCGCGGC CTTGCCGCAT TGGCGGCGGT CTTGTGTTCG
TTCGTTTATC TGGTCGCGCA GATCCAGGGC GTCGGCCTGA TTGCGACGCG GTTTATCGGC
GTGGATTTTG CCGTCGGCAT CTTCTGCGGA CTGGCGGGCA TTCTGGTGTG TTCGTTTCTC
GGCGGCATGC GCGCCGTGAC GTGGACGCAG GTCGCGCAGT ACATCATCCT GATCGCGGCG
ATTCTGATTC CCGTGTCGAT GATCGCGCAC AAGGACGGCC TCGGCTGGGT GCCGCAATTC
AATTACGGCC GCTTGATGGA GCGGGTCGAA GGCCTCGAGA AGCAGGTGCG CGACGATCCG
CTCGAACAGA CCGTGCGCGA CGATTATCGC CGCCGTGCCG CGTTGATGCA GATGCGGCTC
GACACCTTGC CGCAATCGTT CGTCGATGAG AAGCTGCGTC TCACGCAGGA AGTCGCCGAT
CTACGCCGCC ATAACGGCCC GCTGCGCGAG ATCAAGGAGC GTGAACGCTC GCTCGAACAG
TTTCCACGCG ATGCCGCCGC CGCGCAAATC GTCTGGGCCC AGCGACGCGA TGAAATGCTG
ATGCGCGCAG CCGCACCGGT GCCGATGCAT GAGCCGTTTC CCGCCGTGAG TGATGAAGAC
CGGCGCATCC ACGAACGCAA TTTTCTTTCG CTGCTGCTGT GCCTGTCGCT CGGCACGGCG
AGCCTGCCGC ATATTCTGAC GCGCTATAAC ACGACCACCT CGGTGGCTTC AGCGCGACGC
TCCGTCGGAT GGACGCTGTT CTTCGTCGCG CTGTTCTATC TGACGGTGCC GGTGTTGGCG
GTACTGATCA AGTACGAAAT ATTGACCAAC CTGGTCGGCC ATCATTTCTC GGACTTGCCG
CAGTGGCTCA TGCAGTGGCG CAAGGTCGAG CCGAGCCTGA TCAGTCTTGC CGATACGAAC
GGCGACGGCA TCGTGCGGTG GAGCGAGATT CAGATGCAGC CCGACATGGT CGTGCTTGCC
GCGCCGGAGA TCGCGGGGCT GCCGTATGTG ATGTCGGGGC TGATCGCGGC CGGCGCGCTG
GCCGCGGCGC TCTCCACTGC GGACGGTTTG CTGCTCACCA TCGCCAATGC TTTGTCGCAC
GATGTGTACT ACCACATGGT CGATCCGAAC GCGTCGAGCC AGCGGCGCGT GACGATCTCG
AAGATTCTGT TGCTGGGGGT GGCGCTGTTC GCGTCGTACG TGGCGTCGTT GAATACGGGG
AACATTCTGT TTCTGGTGGG CGCGGCGTTT TCGCTGGCGG CTTCGAGTCT GTTTCCGGTG
CTGGTGCTGG GCGTGTTCTG GAAGCGCACC ACGCGCCTGG GCGCGGTGGC GGGCATGGTG
GCGGGGCTGG TGGTGTGCAT CTATTACATC GTCTCGACGT ACCCGTTCTT CACGCAGATG
ACGGGTTTCG CCGGCCCGAG GTGGTTCGGG ATCGAGCCGA TCAGTTCCGG CGTATTCGGC
GTGCCGGCGG GGTTTCTGGT GGCGATCGGC GTGAGCCTGA TCGACCGGAA ACCGGACGCT
TATACGCGGG CGCTGGTGGA CTATATCCGG CATCCTTAA
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| Protein sequence | MKLTNRLISS YALYTLGFLL FIYVMWRIER TTGPGVWIGY VFLFVPIAVY AVIGLLSRTS
DLVEYYVAGR RVPSAFNGMA TAADWLSAAS FIGLAGSIYA TGYDGLAYLM GWTGGYCLVA
FLLAPYVRKL ARYTIPDFLG TRFSSNAVRG LAALAAVLCS FVYLVAQIQG VGLIATRFIG
VDFAVGIFCG LAGILVCSFL GGMRAVTWTQ VAQYIILIAA ILIPVSMIAH KDGLGWVPQF
NYGRLMERVE GLEKQVRDDP LEQTVRDDYR RRAALMQMRL DTLPQSFVDE KLRLTQEVAD
LRRHNGPLRE IKERERSLEQ FPRDAAAAQI VWAQRRDEML MRAAAPVPMH EPFPAVSDED
RRIHERNFLS LLLCLSLGTA SLPHILTRYN TTTSVASARR SVGWTLFFVA LFYLTVPVLA
VLIKYEILTN LVGHHFSDLP QWLMQWRKVE PSLISLADTN GDGIVRWSEI QMQPDMVVLA
APEIAGLPYV MSGLIAAGAL AAALSTADGL LLTIANALSH DVYYHMVDPN ASSQRRVTIS
KILLLGVALF ASYVASLNTG NILFLVGAAF SLAASSLFPV LVLGVFWKRT TRLGAVAGMV
AGLVVCIYYI VSTYPFFTQM TGFAGPRWFG IEPISSGVFG VPAGFLVAIG VSLIDRKPDA
YTRALVDYIR HP
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