Gene Bphyt_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0904 
Symbol 
ID6283853 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp1012933 
End bp1014480 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content61% 
IMG OID642620465 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001894548 
Protein GI187922906 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAATA ACATCACAAT TCGTGGCGGC CTGACGCTGG TGATCAGCGT ATTCGTCGCT 
TTCCTGCTGA CAGTGATCGG TGTCGGCTAT GGCGCGCTCA AGCTCGCCAA CAGCAGCCTC
GACGACACAC AGCGCAGCGC GGCGGCGTTG TCGCATCTGA AGGCGAGCTC AGAGAAGCTG
CTGCAAGTGC AACTCGCGCT GGGTTCGTAT CAGACGCTCT TCAGCGTCGG CAAGCAGACC
GACGACCTGT TGCCGGCCGC GCACAAGGTG CTGGTCGAAT CGAACAAGGA CTTCCGCGAT
TACATGGCCG GCCCGTTTGC GGACGATAAC GAACAGAAGC TCGCGCAGGC CGTGGAACAG
GCGCGCAGCG CGCTGGTGGA TAAGGCGATC GAGCCGGAAT TTAAGGCGCT TGCTGACTTC
GATTTCAATA CCTTCCGAAA TATTCAGGGC GAGACGGCCA ACAGCTTTTA CGCCACTTAT
TCGAAAGCGA TCGACGCGCT CGAACGCTCG CGCATCGAAA GCCAGCATCA GCAAGCACAA
ACGGCGGCGC AGCGTTTCCA GATCGCGACA TTGTTGTTCG CCGCGATTGG CGTCATCGCA
CTTGTGATCG GCGTGGCGGC GCGCATCGGT TTGTCAGTGG CGTTGATCAA GCCGGTCAAT
GCCACCGTCA AGCATTTCGA GCGCATCGCG GCCGGCGATC TGACCGTCGC CATCAAGATC
AAATCTCGCA ACGAGATGGG GCAATTGCTG GGCGCATTGA CGATGATGCG CGACGGGCTC
GTCGAGACCG TGTCGAAAGT GCGCGGCAGC ACGACGGCGA TTACTCAGGG GGCCAACGAG
ATTGCGTCGG GCAATGCGGA TTTGTCCTCG CGCACCGAGC AGCAGGCTGC GGCGCTTCAG
CAGACCGCCG CGAGCATGGA GCAGTTGTCG GCCACGGTGA AACAGAACGC GGACAACGCG
AAGCAGGCTA ACCGTCTCGC TCATGGCGCG CTCGACACGG TCACGCGCGG CGGCAAAGTG
GTGTCGCGTG TCACTGAGAC GATGGATGGG ATCAGCGAGT CGTCGCGCAA GGTGACGGAA
ATCATCGGCA TGATCGAGGG GATTGCGTTT CAGACCAACA TTCTGGCGTT GAATGCAGCA
GTGGAGGCAG CGCGCGCTGG CGAGCAGGGG CGCGGGTTTG CAGTGGTGGC TTCGGAAGTG
CGCAGCCTCG CTCAGCGCTC GGGCGCGGCA GCGAAGGAGA TCAAGGAGTT GATCGGTGAG
TCGGCCGCCA AGGTTCAGGA GGGCGCCTCT CTCGTGTCCG ACGCGCAGAA GACGATTCAC
GAAGCGATGA GCGCGGTCGA GCGCGTGACC GGCGTGATGA ACGAGATCGA GGCGTCCGCG
CTCGAACAGA GCGACGGTAT CGAACAGGTC AACAAGGCCG TCTCGCAGAT CGACGAAGTC
ACGCAACACA ATGCGGCGCT CGTGGAAGAA GCCGCTGCTG CGGCGAAATC GCTGGAAGAG
CAGGCGACTG TATTGCGGGA TGCTGTGGCG GTGTTTCAGA TGGCGTAG
 
Protein sequence
MLNNITIRGG LTLVISVFVA FLLTVIGVGY GALKLANSSL DDTQRSAAAL SHLKASSEKL 
LQVQLALGSY QTLFSVGKQT DDLLPAAHKV LVESNKDFRD YMAGPFADDN EQKLAQAVEQ
ARSALVDKAI EPEFKALADF DFNTFRNIQG ETANSFYATY SKAIDALERS RIESQHQQAQ
TAAQRFQIAT LLFAAIGVIA LVIGVAARIG LSVALIKPVN ATVKHFERIA AGDLTVAIKI
KSRNEMGQLL GALTMMRDGL VETVSKVRGS TTAITQGANE IASGNADLSS RTEQQAAALQ
QTAASMEQLS ATVKQNADNA KQANRLAHGA LDTVTRGGKV VSRVTETMDG ISESSRKVTE
IIGMIEGIAF QTNILALNAA VEAARAGEQG RGFAVVASEV RSLAQRSGAA AKEIKELIGE
SAAKVQEGAS LVSDAQKTIH EAMSAVERVT GVMNEIEASA LEQSDGIEQV NKAVSQIDEV
TQHNAALVEE AAAAAKSLEE QATVLRDAVA VFQMA