Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0849 |
Symbol | |
ID | 6282417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 948609 |
End bp | 949868 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642620412 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001894495 |
Protein GI | 187922853 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCATC GACTGTTGCA GAACATGCTG GCATTGTCGG TATTGCAACT GGCGAATATG GTGCTTCCAC TCGCCACATT GCCGTATCTT TTCCGCATTT TAGGCCCTGA CCAGTTTGGG GCCTATGTAT TTGCCCAGGG TGTAATCGCC TATCTTGTGC TGCTGGCGGA CTACGGCTTC ATTCTGTCGG CCACCGGAGC AATTGCAAAG GTGCAGAACG ACCGCAACGC CGTTTCGAAA ATCTTCTGGA CGACGCAGGC CGCCAAATGC ATCGTAGCGT GCGTGGGTCT CGTACTGCTA CTCCTGGGCG TGCTTTTCGT GCCGAAGCTG AGCGAGCTTC GCCTCGTCAT GTTTGCGACG TTTCCATTGG TGATCGGCAC GTTGCTATTT CCGCAATGGC TCTTTCAAGG TCTGGAGCGG ATGTCCTTTG TCACCATTTC GACCCTGACT TCGCGCCTGT TAGTCATACC GGCTACTTAC CTCTTCATTC ACTCGTCTGA CGACACCTGG CGGGCGGCAC TCATCAGCTC CATGAGTACT GTAGTCGCTG GATGCATCTC GCTTCTATTC GCCGCTCGCT TGAGGTTGAT TTCTTTCTGT CTGCCAAGCG TGAGCGAAGT GGCGGGCGCA TTTCGCGAAG GGTGGCACGT CTTCATGGCG ACTGCGGCAA TCAGCATGTA CACAACCACC AACAGCGTAA TACTTGGTTC GTTGGCGGGC AATGTGACGC TGGGTTATTT CGGTGCCGCC GACAAGATCA GGAACGTTGC GCAGGCGGTG ATAACTCCAC TTGGCAATGC CCTTTACCCG CGTGTCAACG CGCTGTTTGC CGAGGATACG CAGAAGGCCT TTGCGCTCGT TCGCAAGGCG CTTTACGCGA TGAACGCCAT TATGCTTTTT GTTTCCGTGA TGCTCTGGGT ACTTGCGCCG TGGATCGTGC GCTTCGGCAT GGGACCACAA TATGAACCGG CGATCGCTGT TTTACGGTGG CTGGCATTCG TGCCTTGGCT GGTGGCGCTG AGTAATGTGC TAGGGCTGCA AATGATGCTG CCGCTCGGCA TGAAGAGAAA GTTTAGCGAG ATTCTGCTCG TATCGGGCGT GTTCAACGTA GCGCTGTTGG TGCCGCTGTC GTCCGCCTTC GGAGCACAAG GTGCAGCGAT GTCGATACTT GCAACCGAAG CTCTTGTCAC TGCCACCATG GCATTCTATT TGATCCAGAA GAGAGTTCCG CTCTTTGCGC CGCGAGCGGT CACCGACTGA
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Protein sequence | MAHRLLQNML ALSVLQLANM VLPLATLPYL FRILGPDQFG AYVFAQGVIA YLVLLADYGF ILSATGAIAK VQNDRNAVSK IFWTTQAAKC IVACVGLVLL LLGVLFVPKL SELRLVMFAT FPLVIGTLLF PQWLFQGLER MSFVTISTLT SRLLVIPATY LFIHSSDDTW RAALISSMST VVAGCISLLF AARLRLISFC LPSVSEVAGA FREGWHVFMA TAAISMYTTT NSVILGSLAG NVTLGYFGAA DKIRNVAQAV ITPLGNALYP RVNALFAEDT QKAFALVRKA LYAMNAIMLF VSVMLWVLAP WIVRFGMGPQ YEPAIAVLRW LAFVPWLVAL SNVLGLQMML PLGMKRKFSE ILLVSGVFNV ALLVPLSSAF GAQGAAMSIL ATEALVTATM AFYLIQKRVP LFAPRAVTD
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