Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0843 |
Symbol | |
ID | 6284662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 936438 |
End bp | 938126 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642620406 |
Product | hypothetical protein |
Protein accession | YP_001894489 |
Protein GI | 187922847 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGA TTCATCGCCG CCGCAGCCCG TTCAGATCAC GCACGCTCTG GCGCACTACG CTGCCCGCAC TGATGTTTCT GGCTTTCTCG GGCGTCTCAT ACGCGCAGGT CAAGCTGCAA CTGATCAACC CGCCTGGCTC GCAAGTCATG CTGACAAGCG GAAAGAAGAC CCTACGGTTC GAGGTTCTGT CGCCGGCCCG TTTGCGCGCA GCGAGAATGA CGGTGGTCGT TTATTCCTAC GACAGCGACG GCAAGGCGGT GCACACGCCG CTCGCGTCGT ACGAGAAAAC CATCGGCAGC ATGGACAGCG GTAAGGCCAT CGACGTCGAC GTAGCGATCC CGCGCTCCGG TCTATTCCGG GTCGACGCAA CCTTAAAATT ATCCGATGGG GAAATGCTCG ACAAGACCAC GAGCACGATC GCTGTCGTCA CGAAACGCGA CGAGATCGGG CCCTCCGACT TCGGGGTCGG CACGCACTTC GCCCAACGTG TGATACCACC TGCGTCGGTG CTGCTGCCGC TCGTCAAGCA GGCTGGATTC TCGTGGATTC GGGACGACCT CTATTGGGCG GCAATCGAGA AAAAGCCCGG AGTATTCAAA TTTCCCCAGA GCTATGACGC CTACCTGGCC TTATGCAAAC AACTCGGCAT TTCGACTGTA ATCGTTCTTG GCGGCGGCAA CGCGGATGCC TACCCTACAC TGTTTCCGAA GTCGGACTTT CCCTTTTCAT CCGACGCCCG TGCGCGCTTC GCAGCTTACG TCGACGCAGT GGTTGCGCGA TACGGTGACG CCACTGTGGC TGCGCCCTAC GGCGGAGCAG TCAGCCATTG GGAAGTGTGG AACGAGCCTG ACTTCAGCAA GATCAGCTAC GCAGCCTATC TTTCCCTACT ATGGGAAACG TTCGGCGCGA TTAAAGATGT GGATCCCAAT GCATCGGTTA TCTCCTGCGG CGGCGGCGGC TCGGGCGGCG GCCCCGGCGG CGACTGTGTG GTCGGCTTAC TCGAGGAAGG AGGGCTAAAC GACCAGACCG GCTTCAGCGT ACATCCCTAT ATGTCGCCAA ATACGCCAGA AAAGGGCTAC AAAACCGTAG ACGCACCAAT CGACGCCGTG AGTATCCCGA CAGTGTGGCC CTATCTGAAG GACTTTGCCG CTGACCGTGT GAAAGCCGAC GGCCGCCCTC TGCAAGTTTG GGTGACGGAG ATGGGCTGGC CCGTCAACCC CAAGGAACCG GGGCAAGACG AGGCCATGCA AGCGGCCAAT CTGGCGCGCA GCTTTTTGCT GTCACGGCGC TATGGCACGG TTCGCGTCCT GTTCTGGTAT GACTTTGTCG ATGACGGCAC CGACCCATAT AACATCGAAC ATAATTTTGG GTTACTGCAT TACGACCTGA CGCCGAAACC GGCATTCGTC GCGGCATCTG TATTAACCAG CACAGTCGGC AAGCGACCGT GGGTGAAGGC GTTGATCGAC TCGGACAACG TCAAGGCGTA TCAATACGGA AACGACGATC CGGTTATCGT CGGCTGGACC GCCGACGGCA AGCAACATGA CGCAGTCGTG ACCCTGCCGC CGGGAAAATA CATACAACGT GACTGGCAAG GTGTCGATAC GCCTCTGCCG ATCAGTGCTC AAGCGCTCCA CTGGCAAGTG GGCTCAATTC CCCGCTACCT GATACCCGAA CGACGGTAG
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Protein sequence | MPTIHRRRSP FRSRTLWRTT LPALMFLAFS GVSYAQVKLQ LINPPGSQVM LTSGKKTLRF EVLSPARLRA ARMTVVVYSY DSDGKAVHTP LASYEKTIGS MDSGKAIDVD VAIPRSGLFR VDATLKLSDG EMLDKTTSTI AVVTKRDEIG PSDFGVGTHF AQRVIPPASV LLPLVKQAGF SWIRDDLYWA AIEKKPGVFK FPQSYDAYLA LCKQLGISTV IVLGGGNADA YPTLFPKSDF PFSSDARARF AAYVDAVVAR YGDATVAAPY GGAVSHWEVW NEPDFSKISY AAYLSLLWET FGAIKDVDPN ASVISCGGGG SGGGPGGDCV VGLLEEGGLN DQTGFSVHPY MSPNTPEKGY KTVDAPIDAV SIPTVWPYLK DFAADRVKAD GRPLQVWVTE MGWPVNPKEP GQDEAMQAAN LARSFLLSRR YGTVRVLFWY DFVDDGTDPY NIEHNFGLLH YDLTPKPAFV AASVLTSTVG KRPWVKALID SDNVKAYQYG NDDPVIVGWT ADGKQHDAVV TLPPGKYIQR DWQGVDTPLP ISAQALHWQV GSIPRYLIPE RR
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