| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0680 |
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| Symbol | |
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| ID | 6283638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 747186 |
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| End bp | 748307 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642620244 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001894328 |
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| Protein GI | 187922686 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAACG TAGGCAGGTT GGCGGCGGTC GCGGTGCCCG CGGCATTGGC GTCGTTGGGA
TGTCAGTTGG CGCAGGCGCA ATCCAGTGTG ACGCTGTACG GCGTGGTCGA CGAAAGCGTG
CGCTACCTGA CTCACGCCAA CAAGGCCGGC GATTCGTCGA TTGGACTCGG CACGGGCGGC
ATGACGCAGA GCCGCTGGGG GCTGAAGGGC GTCGAGGATC TCGGCGGCGG CTGGTCTACC
TTCTTCAAAC TCGAAAACCG CATCTACGTC AACACCGGCC AGAGCGATCC CACGCTGCCG
TTCTTCAATG AAGCACAGGT CGGCGTGCGA TCGGATTCGT ACGGCCAGAT CATCCTCGGG
CGGCAGTACA ACGTGGTGAT CGAAGGTGTC ACGGTGGCCG GCTACGGCAG CAATTCGTGG
ATCCCGTACG ACTTCAGTTT TCAGCCTGAA ATCACCATGA CGGGCGGCAT CTGGACCAGC
AACCAGGTGC AATATCAGGC CAGATATAAC GGCTTCACGT TCGCCGCCGG CTATGCATTC
GGCGGCAATG CGGGCAATTC ATACGGCAGC CAGATCGGCG CGGCCGCAGC TTATAAACCC
GAAGGCGGTC CGTTGAGCGT GGGCGGCGCG TACGAAGTGT CGAAAGATTC GGTCAACGGC
GCCGCCGCGA AGACATGGAC TTTCGGCGGC GCGTACACGT GGAATCTGAC GCGTTTTTCC
GCCGGCTATA TCGTCAATCA GAACGACGCG GGCTTTTCGA ATTTCGCCAA TGGCCCGTTC
ACCGCGCCCG TGCTGGCGGC GCTCAAATAC ACGGACTTCG CGCGGCGCCG CATGATCATG
GGCGGCATCA CGCAACAGGT GAGCAACAAG TGGCACTTCG CCGCGAACGT CTGGCGCACG
TTGCAGGACG GTAAGACCGC CGCGCAGGAC GGCTCAGCGT GGCAATATCA ACTGGTTGCC
GACTACAACC TGTCGCGGCG CACGGACGTC TATCTGGAAG GCGATTATTC GCTGTATCGC
GGCGACCTGA TCGGCGCGCA ACTGCAGGGC GTCAACAGCG TCGGGCTCGC GCAGAAGAGC
TCGCAGATCG GCTTGATGGC AGGTATTCGA CATCAGTTCT GA
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| Protein sequence | MKNVGRLAAV AVPAALASLG CQLAQAQSSV TLYGVVDESV RYLTHANKAG DSSIGLGTGG
MTQSRWGLKG VEDLGGGWST FFKLENRIYV NTGQSDPTLP FFNEAQVGVR SDSYGQIILG
RQYNVVIEGV TVAGYGSNSW IPYDFSFQPE ITMTGGIWTS NQVQYQARYN GFTFAAGYAF
GGNAGNSYGS QIGAAAAYKP EGGPLSVGGA YEVSKDSVNG AAAKTWTFGG AYTWNLTRFS
AGYIVNQNDA GFSNFANGPF TAPVLAALKY TDFARRRMIM GGITQQVSNK WHFAANVWRT
LQDGKTAAQD GSAWQYQLVA DYNLSRRTDV YLEGDYSLYR GDLIGAQLQG VNSVGLAQKS
SQIGLMAGIR HQF
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