Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0647 |
Symbol | |
ID | 6283521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 709114 |
End bp | 709542 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642620212 |
Product | histidine triad (HIT) protein |
Protein accession | YP_001894296 |
Protein GI | 187922654 |
COG category | [F] Nucleotide transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.780647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.90331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTGCG TTTTTTGCCG TGAAGATGGC GGCGATGTGC TGTGGCACGA CGACACCTTG CGTGTCGTCC TCGCCGATGA ACACGATTAC CCGGGCTTCT GCCGGGTCAT CTGGAACGAG CATGTGGCCG AGTTTTCCGA CCTCGACGGA CATGACCGCG ATCGCGTGAT GAAGGCCGTG TACGCGGTCG AGCGCGCGAT CCGGCGCATC CTTGTCCCGG CAAAGGTCAA CCTGGCGAGC CTCGGCAACC AGGTTCCGCA CGTGCACTGG CATGTGATTC CGCGTTTTTC AAACGACGCT CATTTCCCGC TGCCCATCTG GGCGCCGCGC CAGCGCACGG TGTCCGAAGC CATGCTGTCG TCGCGCCGCG CGCAAGCTAC GTTGCTGCGC GAAGCGGTCC GGCAGGAAAT CGAACTGGCG CTGGCTTGA
|
Protein sequence | MDCVFCREDG GDVLWHDDTL RVVLADEHDY PGFCRVIWNE HVAEFSDLDG HDRDRVMKAV YAVERAIRRI LVPAKVNLAS LGNQVPHVHW HVIPRFSNDA HFPLPIWAPR QRTVSEAMLS SRRAQATLLR EAVRQEIELA LA
|
| |