Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0641 |
Symbol | |
ID | 6282115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 699193 |
End bp | 700674 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642620206 |
Product | N-acyl-D-amino-acid deacylase |
Protein accession | YP_001894290 |
Protein GI | 187922648 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.388826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACTCGC ATCCCGAAGC CGCTGATACG CTGATCGTCG GCGCGCAACT GTATGACGGC ACGGGCGCGC CGCCTGTCGA ACGCGATGTC GCGGTTCGCG ACGGCCGCAT CGTCGCGATC GGCAATCTGT CGAACTGGCT CGCCGAAGAA GTGATCGAGG CCGAAGGCCG CGCGTTGGCG CCGGGTTTCA TCGACGTTCA CACGCACGAC GACACGCACG TGATCCGCTC GCCGCAAATG TTGCCGAAGA TCACGCAAGG CGTGACGACG GTGATCGTAG GCAATTGCGG CATCAGCGCG TCGCCGGTTG CACTCAAAGG CGACCCGCCT GATCCGATGA ATCTGCTCGG CGAGCGCGAC GCATTCCAGT ATCCGACCTT TGCCGCGTAT GTCAAAGCGG TGAACGCGGC GCGGCCGGCG GTGAATGTCG GCGCGCTGAT CGGCCATACG GCGTTGCGCA GCAACCAGAT GGACCGGCTC GACCGCGCGG CGACCCCGCA GGAAATCGAC GGCATGCGCG CCCAGCTCGA AGAAGCGTTG GCCAACGGCG CGTTGGGTCT GAGCTCCGGT CTCGCATACG GCTCGGCCTT CTCGGCGCCG ACCGAAGAGG TGATGGCGTT GGCCGAACCA CTTGCCGCAG CCGGCGCGTT GTACACCACG CACATGCGCA CCGAATTCGA CGCAATTCTC GACGCGATGG ACGAGGCGTA TCGCGTGGGC CGTCACGCGC ACGTGCCGGT GGTGATTTCG CATCTGAAGT GCGCGGGTCC GTCGAACTGG GGACGCAGCG AAGAAGTGCT GAAGTCGCTC GAAGGCGCGA GCCGCCTGCA GCCGATCGGT TGCGATTGCT ATCCGTACAA CCGCAGTTCG TCGACGCTCG ATGTGAAACA GGTGACGGGC GATATCGACA TCACGATTAC GTGGTCGGAG CCGCATCCGG AGATGGCGGG CAAGCTCGTG AAACAGATTG CGGCGGAGTG GGGCGTCTCG CAGCAGGAAG CCGGCAAGCG CCTGCAACCG GCGGGCGCGG TGTATCACAA CATGTCCGAA GACGACGTGC GGCGCATTCT TTCGCATCCC GCGACCATGG TCGGCTCGGA TGGTTTGCCG AACGATCCGC TGCCGCATCC GCGCTTGTGG GGCGCGTTTC CGCGCGTGCT TGGCCACTAT GCGCGCGACG CGGGCTTGCT GCCGCTCGAA GAAGCGGTGC GCAAGATGAC CGGTTTGTCG GCGCGTCGCT ATGGACTCAC GCAGCGCGGC GAGGTGCATA TCGGTTACCA CGCCGATCTG GTTTTATTCG ACCCGGCCAA GGTGCGCGAC GTGGCGACGT TCGAGAACCC GCAACAGGCC GCCGACGGCA TCGACGCGGT GTGGGTGAAC GGCGTGTTGA CGTATCGCGA TGGTGAAGTG ACAGGCGAAC GCGCGGGTCA CTTCGTGGCG CGCGGCGCGG CGTCGAAAGG CGATGCGCAC GGCGCGTTCT GA
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Protein sequence | MHSHPEAADT LIVGAQLYDG TGAPPVERDV AVRDGRIVAI GNLSNWLAEE VIEAEGRALA PGFIDVHTHD DTHVIRSPQM LPKITQGVTT VIVGNCGISA SPVALKGDPP DPMNLLGERD AFQYPTFAAY VKAVNAARPA VNVGALIGHT ALRSNQMDRL DRAATPQEID GMRAQLEEAL ANGALGLSSG LAYGSAFSAP TEEVMALAEP LAAAGALYTT HMRTEFDAIL DAMDEAYRVG RHAHVPVVIS HLKCAGPSNW GRSEEVLKSL EGASRLQPIG CDCYPYNRSS STLDVKQVTG DIDITITWSE PHPEMAGKLV KQIAAEWGVS QQEAGKRLQP AGAVYHNMSE DDVRRILSHP ATMVGSDGLP NDPLPHPRLW GAFPRVLGHY ARDAGLLPLE EAVRKMTGLS ARRYGLTQRG EVHIGYHADL VLFDPAKVRD VATFENPQQA ADGIDAVWVN GVLTYRDGEV TGERAGHFVA RGAASKGDAH GAF
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