| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0387 |
|---|
| Symbol | |
|---|
| ID | 6282112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 421365 |
|---|
| End bp | 422471 |
|---|
| Gene Length | 1107 bp |
|---|
| Protein Length | 368 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642619950 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001894036 |
|---|
| Protein GI | 187922394 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCAAA TCGAATGTGT AGTGATCGGC GCCGGCGTGA TCGGTCTCGC GGTGGCGCGC
GCACTGGCGG CGCGGGGCCG CGACGTCATC GTGCTGGAAG CGGCTGAAGC TATCGGCGTG
GGCACCAGCT CGCGCAACAG CGAAGTGATT CACGCGGGCA TCTACTATCC GCGCGGTTCG
CTCAAAGCCG CGCTTTGCGT GCGCGGCCGC GAGATGCTCT ACGACTACTG CGTCGAGCGC
AACGTGCCGC ATTCACGCTG CGGCAAATTG CTGGTCGCCA CTTCGCGCAA CCAGATTCCT
CAGCTCGAAA GCATCATGGC CAAAGGCCGC GACAACGGTG TGCTCGACCT CATGCGAATC
AGCGGCGACC AGGCGCAAGC GCTCGAACCC GCGCTCGAAT GTGTCGAAGC AGTGTTCTCG
CCGCAGACGG GTATCGTCGA TAGTCACCAA CTCATGCTGG CGCTGCAGGG TGACGCCGAA
CGCGACGGCG CGGTGTGTGC GTTTCACGCC CCCGTCAAAG CGATCGAAGC GAGCAATGGT
CGCTTCATCA TCAACGTGGG CGGCGGCGCA CCGACCACGA TCAGCGCAGC GTGCGTGATC
AACAGCGCCG GTTTGCAGGC GAATGCGTTG GCGCGCAGAA TCCGCGGACT CGACGCGCGG
CATGTGCCGC CGCTCTATCT CGCGCGCGGC AACTACTTCA GCATCTCGGG GCGCGCACCA
TTCAGCCGTC TGATTTATCC GATGCCGAAC GAGGCCGGCC TCGGCGTGCA TCTGACCATC
GACCTCGGCG GCCAGGCGCG CTTCGGTCCC GATGTCGAAT GGGTCGATGC AATCAATTAC
GACGTCGATC CGCGTCGCGC GGAATCGTTT TACGCGGCGA TTCGCACCTA TTGGCCCGCG
CTTCCGGACG ATGCATTGCA GCCCGCCTAT GCGGGGATTC GTCCGAAGCT ATCCGGTCCC
GGCGAACCCG CTGCCGACTT CGTGATTCAA GGTCCGGCCG CGCATGGCGT GCGTGGACTC
GTCAATCTGT TCGGTATCGA GTCGCCGGGA CTGACGGCGT CGCTCGCGAT CGCGCAGCGA
GTGTGCGAGT TGAGCGGACG CGCTTGA
|
|---|
| Protein sequence | MDQIECVVIG AGVIGLAVAR ALAARGRDVI VLEAAEAIGV GTSSRNSEVI HAGIYYPRGS
LKAALCVRGR EMLYDYCVER NVPHSRCGKL LVATSRNQIP QLESIMAKGR DNGVLDLMRI
SGDQAQALEP ALECVEAVFS PQTGIVDSHQ LMLALQGDAE RDGAVCAFHA PVKAIEASNG
RFIINVGGGA PTTISAACVI NSAGLQANAL ARRIRGLDAR HVPPLYLARG NYFSISGRAP
FSRLIYPMPN EAGLGVHLTI DLGGQARFGP DVEWVDAINY DVDPRRAESF YAAIRTYWPA
LPDDALQPAY AGIRPKLSGP GEPAADFVIQ GPAAHGVRGL VNLFGIESPG LTASLAIAQR
VCELSGRA
|
|---|
| |