Gene Bphyt_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_0207 
Symbol 
ID6281440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp223174 
End bp223695 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content61% 
IMG OID642619772 
Productprotein tyrosine phosphatase 
Protein accessionYP_001893861 
Protein GI187922219 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.538928 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACA AGACCTACAA CATTCTGGTC CTTTGCACGG GCAACAGTGC CCGAAGCATC 
ATGGCCGAGG CGCTTTTTAA CACGCTAGGC AAGGGTCGAT TCCACGCGTT CAGCGCAGGC
AGTCACCCGT CAGGCGCGGT CAATCCGTTT GCGATCGAGC GCTGCGAGTC GCTGGACTAC
GACACGGCCG GGCTGCGCAG TAAGAGCTGG GATGAGTTCG GTGCACCCGA CGCGCCGCAA
ATGGACTTCG TGATCACCGT GTGCGACCAG GCGGCTGGCG AGGTGTGCCC GATATGGCCC
GGTAAGCCGA TCACCGCGCA CTGGGGTTTT GAAGACCCTG CCGCATTCGT GGGCAGCGAC
GAAGAGAAGC GCGCGGTCTT CACCAAGGTC TATCGGCAGA TTCTGACGCG GGTGAGCCAG
TTTGTGAACC TGCCGTTGCA CGTACTCGAT CGCAATGCCG CCCAGAATGA AGTGCGCGCG
ATTGGCGAAC GTCCCGCCGA GGAATCCAAT GGGCAGCACT GA
 
Protein sequence
MNDKTYNILV LCTGNSARSI MAEALFNTLG KGRFHAFSAG SHPSGAVNPF AIERCESLDY 
DTAGLRSKSW DEFGAPDAPQ MDFVITVCDQ AAGEVCPIWP GKPITAHWGF EDPAAFVGSD
EEKRAVFTKV YRQILTRVSQ FVNLPLHVLD RNAAQNEVRA IGERPAEESN GQH