Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_0164 |
Symbol | |
ID | 6281708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 178278 |
End bp | 179435 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642619738 |
Product | TrbL/VirB6 plasmid conjugal transfer protein |
Protein accession | YP_001893827 |
Protein GI | 187922185 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 0.745375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCC TCTTTACCGC CGTGGGCGGC ACGCTCGAGA ACGGCATGTC CACGTATGTC ACGAGCGTGT CCTCTGCGCT TTCCAGCGCG CTGGTGCCGG TCGTCACGAC CGCAGTGTCG ATCTGGATCA TCACGTACGG GTTCGCCGTG GTGCGCGGCG AAGCCCATGA ATCCGTCCCG GCATTCGCGT GGCGGGGGCT GAAGGTGGCC GTCATCCTCG CCTTTGCGCT CGGGTCGGGC ATCTACCAGT CGCAGGTCGT CACCGTAGTC GAAGGGGCCA CGACGGGGCT TGCGCAGACG ATCCAGACCG CCGCCGCCAA CGCGGGAGCG GGTAACGCCG GCTGCGGGAC TGTGAGCGGC AGCAGCGTGA CGGGCACGAG TGCATCCGCC ATTTACCAGA CGCTCGACTG CTACGACCAG CAGATCAATC TGGTGATGGA TGCGTACTTC AACAAGGCAA CGCATGAAGG CTTCAGCATC GCCGGCATCG TCGCAGGGGT GGGCGATTTT CTCTGCGGGC TGGTGGCGGC GCTCGGCGCG TCGGTCTTCC TGATCATTCT CGCGTTCGAG GTCGTCATGG CGAGGATGCT GCTGGATCTC GTGCTTGGCC TTGGGCCCCT GTTCATTGCG TGCGGGGCGT TCAGTCCGAC CGCCCGGTTC TTCGAGGCGT GGATGGCCAA GATTGCCAAC TACGCCCTGC TGCAGGTGCT CATCGCGGCC TTTCTGGGCA TGGCGCTCAC CGCATTTTCT GCGGATCTTG CTCCGTTTCA GGTGACGACG TCGGCACCCG ATGCGAACGC GTCTGCGTTG ACGGCGGCGA TTCAGGGCGC ACTCGATAAC ACGGCGTCCT GGGGGGCGGG GCTTGGCATG TTTGTGACGG GCGTGCTGCT GGCGACAGTG GGGTGGCAAC TGCCTGCCGT CGCCTCTGGC CTGGCGGGTG GCGCCACGCT GTCCGGCTTC GGTGCCTTCG TGGCGGGATA TGCCGCGCGG CAGGCTCTGC GCGGCCTCGG GGCGGCCGTC CAGTTCGGGC ACGGGCCGCG TCGCCCCGGT GGAAAGATTT CGGATGGCGG CACACGAAAC GGTTCAACAC CTGCCTACCA GCGTATCGCC CGCGAGCATC TGGGTGACCT GGATAACAGA GGAGGGTCAT CGTCATGA
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Protein sequence | MSGLFTAVGG TLENGMSTYV TSVSSALSSA LVPVVTTAVS IWIITYGFAV VRGEAHESVP AFAWRGLKVA VILAFALGSG IYQSQVVTVV EGATTGLAQT IQTAAANAGA GNAGCGTVSG SSVTGTSASA IYQTLDCYDQ QINLVMDAYF NKATHEGFSI AGIVAGVGDF LCGLVAALGA SVFLIILAFE VVMARMLLDL VLGLGPLFIA CGAFSPTARF FEAWMAKIAN YALLQVLIAA FLGMALTAFS ADLAPFQVTT SAPDANASAL TAAIQGALDN TASWGAGLGM FVTGVLLATV GWQLPAVASG LAGGATLSGF GAFVAGYAAR QALRGLGAAV QFGHGPRRPG GKISDGGTRN GSTPAYQRIA REHLGDLDNR GGSSS
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