| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_0153 |
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| Symbol | |
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| ID | 6283897 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 169621 |
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| End bp | 170655 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642619727 |
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| Product | porin Gram-negative type |
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| Protein accession | YP_001893816 |
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| Protein GI | 187922174 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACAGGG ATGGTCGGGG AAGGTGGAGG AAGGGTCTGG CAGCACTGTC GTTGTGCATC
ACGGCGGGTG CAGCGCACGC GCAGTCGTCA GTGTCGCTAT ACGGACTGGC CGATGCGTTT
GCCGGCGTGG TGCGTACGCC AGGCGCGTCA GGCAACACCT GGCAGGTGGG TTCGGGCGGG
CTTTCGACAT CGTACTGGGG CATGTCGGGC GCCGAGGACC TGGGCGGTGG CATGAAGGCG
ATCTTCACGC TCGAGAGCTT TTACCGGATC ATCAGTGGAC AGTTGGGGGC GTACAACGGA
CAGTCCTTCT TCGGGCGCCG CGCGTTCGTG GGTTTAAGTG GCCCGTTTGG TCAGCTGACA
CTGGGGCGCA ATGATTCGCT GCTGTTCGTC TCGACTCTGC TGTTCAACCC GTTCGGCAAC
TCGTTCGTCT TCTCCCCCAT CGTGGTCCAC AGCTTTCTGG GCTCCGCGAT GGGTGCGGCT
TCCGTGCAAA GCGATACGGC GATCGACGAT TCGATCGTCT ACCAGACGCC TGAGATTGGC
GGACTCACGG GCAGTCTGCA GTACAGCAAT GCGGGCGTCG CGGGCCACGC CGGGCAGGCA
AACTACAGTG CGAACGTGCT CTACTTTGCG GGGCCGTTTT CTGCGACGGC CGCAGTCCAG
AGCCTGCACA CCGCGTCGCT TTTCCTGAAC GGCGCCACGG AACAGACAGC GTGGCTGGTC
GGCGCCGCGT ATCGCCTGCA GGCGGTAAAG CTCTATCTCC AGTATGAGCG GGTGACCAAC
AACAACGAGC TCACCGACGA TACCGTTCAG GTGGGCGCGA GCGCGCAGGT CGGCACGGGC
AGCATACTCC TGTCCTGGGC GGGAACGCTC AGGCAGCCGG CACAGGGCGC GGATGTCCGC
TGGTCGACCG TGGTGCTCGG GTATGACTAT CCACTCTCGA AACGCACGGA CGTCTACGCC
GCATGGAGAT ACGACACCAT GACCAGCGTC TCGTCCGGCA ACAGCCTGGG CGCCGGTATC
CGGATGAAGT TCTAG
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| Protein sequence | MYRDGRGRWR KGLAALSLCI TAGAAHAQSS VSLYGLADAF AGVVRTPGAS GNTWQVGSGG
LSTSYWGMSG AEDLGGGMKA IFTLESFYRI ISGQLGAYNG QSFFGRRAFV GLSGPFGQLT
LGRNDSLLFV STLLFNPFGN SFVFSPIVVH SFLGSAMGAA SVQSDTAIDD SIVYQTPEIG
GLTGSLQYSN AGVAGHAGQA NYSANVLYFA GPFSATAAVQ SLHTASLFLN GATEQTAWLV
GAAYRLQAVK LYLQYERVTN NNELTDDTVQ VGASAQVGTG SILLSWAGTL RQPAQGADVR
WSTVVLGYDY PLSKRTDVYA AWRYDTMTSV SSGNSLGAGI RMKF
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