Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_7564 |
Symbol | |
ID | 6249148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010627 |
Strand | + |
Start bp | 328724 |
End bp | 331783 |
Gene Length | 3060 bp |
Protein Length | 1019 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642599141 |
Product | relaxase/mobilization nuclease family protein |
Protein accession | YP_001863547 |
Protein GI | 186474576 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0784017 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.290124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGATTC GGGTGCGCGG TTATCACGAT GGCATAAAGG CCTATCTGGA GGACGGCCAG AAGCAGGACC GTGAGTTCGA GCGCGACGAG ATGGACGAGC GGGTGATTCT GGCGGGCGAT CTGGCGCTGA CCAACGACAT CATCCAGTCG ATGGATACGC AGGCAGAACG CTATATCAAC GTCACGCTGT CGTTCAAGGA AGATGAGGTC TCGGGCGAGG TGCTCGCGGA CATCGTACGG GAGTTTGAGG CGTTCGCGTT TGCTGCGTAC CGGCCGGACG AGTACAACTT CTATGCAGAA GCACATGTGC CGCGTCTGAA GAGCTATGCC GACCGGCGCA GTGGCGAACT CGTCGAGCGC AAGGTTCATC TACATGTCGT GATACCGGAA GTGAACCTGC TCACGGGACG ACGGCTGGAA CCGTTCGGCA AGGTTGACCG GCATCACCGG TTCCTCGAAG CATTCCAGGA GCATATCAAC GCGAAATACG GACTGGCGAG TCCGAAGGAC AACCGGCGCG TGCTCTTCAC CGACGCGTCG GAGATGATCA GCCGGTACAA GGGCGACGTA TTCGAGCCGA TGAACCGCGA ACTGAAGGCC GCGATCCTCG AGGCGTTGAT TGCGCGCGAT GTCAAGCATT ACGAGGACTT CAAGGCGCTG CTCACGGAAT TCGGCGCGAC ACGCACACGT AACGCGGGCC GCGATGGCGA ATACGAAAAC ATCAGACCGC CCGGCGCCGC GAAGGGCGTG AATCTGAAGG AATTCGTGTT CTCGCGCGAA TTCATCGAAC TCGATGCCGA CGGCAAGCGC GAAGCGCTCG ATCACAATGT CCATGAGGAA TACATCGAAC CGGGGGTACC GCGCGTGACG CCCCAGCACT TTCTCGATGC CCTATTCGAG TGGAACGATA TGCGGGCCCG CGAGATCAAG TATCTGAACA GCGGAAGCAG CTTCTACAAG TCGTATCAGG CCGCGTCGCC GGTAGAACAG CGGCGCATCC TTGAACATCG CGAACAGCGG TTCTATGACG CAGCAGGAGG GCTCGATGAG CGAACACGAC GCAGCAGTGG TGGATCAGGA AACTGGCGAG ATTGGCGAGA GCGGCAACGC CCGCAGCCGT GGTACGAGCC GCAGCTCACG CAACACGAAC ACCGGCGGCG GTGGCGACGA GGCGCGGATC ACGACCTTGA CGCTCGCTTC GATCGACCCC GCCCGCCGAC CGGATGCCCA CACGGTGTGC GAGGTGTGCC CGGCCGCAGT GTGGATGGCG ACACCGCGCG ACGTCAAATG CTTCTGCCGG CTGATGCACT ACTGGAGCTG GGAGACCACC AAGCCGACCG AATTGACTCA CTGCGATGGA CTGGCGATCG CGAGCGAACG GGAAGAGAAC AGCTAGATCC ACGAAGCAGC GGCAGCAATC CGCTGCTCGA CGCGATCGCG GCACGCATGT ACGGCGCGTG GGACAAGGCG GACGATGCAG CGCGGGTGCG CCTTGCGGCG ACAGCGGCCG ACAAGTTCAT GCGTCGCGAC GGATCGCCCG GCGATCAGCA GCACGCCGTC CGTTCGTTCG GTCTGGATCC GCGACTGGTC GGTAGCCGGT TGCGGGCAGC GTTGGGCCCG CGTAATGAGA TCTGTAGCCT TGCAGACGTC CAGTCGCTCG ATGCGGTCAA GTCGCTTCCG TTTGCATCGT CCGCAGCTGG CAACGCGACG CCAACAGTTC CGTTCAATGC ACGCGCGCGA TCGGCGACGG GCCGGGAAGC AGATACCGTT CGGGACCAGT TCGCGCGCGA TCTTGTGGAG TCGCGCAGTG TCCGTCGCTC GCGCGAGCGG ACGGAATTTG CAGAGATCCG CGCGACCCTC GATGCCAGCC GGCTGCTTGC CGCACTTGCC CACTCGCACG GGCTGATCGT CGACAAGTAC GACATTGGCA AGGGTGAGGA CGGCGGTGAC CGGATTCGAG CTGGCTCACG CAATCTGAAC GTGTCGGACT TCTTGACAAA GGAAATGAAC CTGTCGTGGG ACGAAGCTGC ACATCTGCTA CGCGACGCAT ATCGGGCGCA GACGGGACGC AGCCCCGGTC ATGCGCCGCG CCACACGCCC GAGCGTGATC TGTGGGGCGA ATTCCAGCAG TGGCGTGCAG CGTATCGCGA CGAACTGCGT CGTGCGTGGG ATGCACAGGC GCGGCACGAT AAAACGAGAC GTATCGATAT CAAGGCGGCC TTCTACCGCG CCCGTAACGA CCTCGCGGAT CGCAACGATC TGCCGGTCAG CGAGCGGCGC GAGAAGCTGT CGGCGGCACG TGTCGCTCGC CTCGAGGCTG AGGCCGCGCT GCGCGAACGG ATCGCGAACG AGCGTCATGC GCTCAAGGCT GCCGCTCGCC GGCCGATCGC GGACCAGTAC CAGGACTTCC TGCGGGAGCG CGCACGGGCC GGTGACGCAC GCGCGCTGCG CGAACTGCGC CGCATGCAGC AAATCCGCCT GCAGGCGAGG AGCGCCGATG ACGAACGCGG TGTCATTTTC AGTGGTCCGT CACATGGCGT GCAGCGACCG TCCGCGTCCG ATCGCAACGA GATCATCTAT CACGGGCCGA CGATCACCTA CGAGGTACGG GCGAGCGGCG AGGTCGACTA TCGCAAGGAC GGTACGGCGT TCCTCGTTGA CGAGGGCCGC TCGCTGCGAC TGTGGGATAG CGAGCGCGAC GCGATCGAGA TTGCGCTGCG TTTCGCGCAG CAGAAGTTTG GCGCCACGCT GTCACTGTCC GGTCCCGAAG CATTCCAGGC CGCGGCCGCG TGCATTGCGG CCGACACACG CATGCGGATC GTGTTCGACC AGCCCGAGCT CGAGAGCATC CGGCAGATGC GGCTTGCGGA GCTCGATGCC GAGGCACAGG ATCGTCGAAC CGCACGGCGC GAGCGCGACG CACGGGAACG CGACGAACTA CGCGACGCCA TGCGTAATAC GCAACTACCT GTCCGCGACG GCCAACCCAC TGCAGCCCAG GATGCCGAGC CACCCGCTGA ACCCGATGCA CCCGGCAGCG GGCCGGATAT CAAACGCTGA
|
Protein sequence | MLIRVRGYHD GIKAYLEDGQ KQDREFERDE MDERVILAGD LALTNDIIQS MDTQAERYIN VTLSFKEDEV SGEVLADIVR EFEAFAFAAY RPDEYNFYAE AHVPRLKSYA DRRSGELVER KVHLHVVIPE VNLLTGRRLE PFGKVDRHHR FLEAFQEHIN AKYGLASPKD NRRVLFTDAS EMISRYKGDV FEPMNRELKA AILEALIARD VKHYEDFKAL LTEFGATRTR NAGRDGEYEN IRPPGAAKGV NLKEFVFSRE FIELDADGKR EALDHNVHEE YIEPGVPRVT PQHFLDALFE WNDMRAREIK YLNSGSSFYK SYQAASPVEQ RRILEHREQR FYDAAGGLDE RTRRSSGGSG NWRDWRERQR PQPWYEPQLT QHEHRRRWRR GADHDLDARF DRPRPPTGCP HGVRGVPGRS VDGDTARRQM LLPADALLEL GDHQADRIDS LRWTGDRERT GREQLDPRSS GSNPLLDAIA ARMYGAWDKA DDAARVRLAA TAADKFMRRD GSPGDQQHAV RSFGLDPRLV GSRLRAALGP RNEICSLADV QSLDAVKSLP FASSAAGNAT PTVPFNARAR SATGREADTV RDQFARDLVE SRSVRRSRER TEFAEIRATL DASRLLAALA HSHGLIVDKY DIGKGEDGGD RIRAGSRNLN VSDFLTKEMN LSWDEAAHLL RDAYRAQTGR SPGHAPRHTP ERDLWGEFQQ WRAAYRDELR RAWDAQARHD KTRRIDIKAA FYRARNDLAD RNDLPVSERR EKLSAARVAR LEAEAALRER IANERHALKA AARRPIADQY QDFLRERARA GDARALRELR RMQQIRLQAR SADDERGVIF SGPSHGVQRP SASDRNEIIY HGPTITYEVR ASGEVDYRKD GTAFLVDEGR SLRLWDSERD AIEIALRFAQ QKFGATLSLS GPEAFQAAAA CIAADTRMRI VFDQPELESI RQMRLAELDA EAQDRRTARR ERDARERDEL RDAMRNTQLP VRDGQPTAAQ DAEPPAEPDA PGSGPDIKR
|
| |