| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7050 |
|---|
| Symbol | |
|---|
| ID | 6248564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 1714133 |
|---|
| End bp | 1715203 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642598699 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001863101 |
|---|
| Protein GI | 186471783 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.348083 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTC TCACCCTGCA AGGCATCTCG AAGCGCTACG GCGATTTCAC TGCCGTCGAG
CATCTCGATC TGTCCGTCGA ACGCGGCGAG TTTCTATCGC TGCTCGGGCC GTCCGGCTGC
GGCAAGACGA CCACGCTGCA GATGATCGCC GGCTTCATCA CGCCGAGCGC AGGCCGCATC
ACGCTCGGCG GACGCGACAT CACGCACGAG CGCCCCGAAA GGCGCGGCAT GGGCGTCGTG
TTCCAGAGCT ATGCGCTGTT TCCGCATATG ACGGTGGCGG GCAACGTCGG CTTCGGCCTC
GAAATGCGCA ACATGAAGCG TGACGAGCGC GCAGTGCGCA TCGCCGAAGC ACTCGATCTG
GTTCGGCTCA AAGGGCTGGA CGCGCGTTAT CCGAAGGAAC TGTCGGGCGG CCAGCGCCAG
CGCGTCGCGA TTGCGCGGGC GCTGGCGATG CGCCCCGACC TGCTGCTGCT CGACGAACCG
ATGTCGAATC TCGACGCGAA GCTGCGCGAG GAAATGCACA TCGAACTGCG CACGATCCAG
AAGCAACTCG GCATCACGAC GATCCTCGTC ACGCACGACC AGGTCGAAGC GATGACGATG
AGCGACCGCA TCGCCGTGCT GCACAAGGGG CGCATCGCGC AGCTGAGCAC GCCGTTCGAT
GCGTACGAGC GCCCTGCCAC GCCGTTCGCG TCGACCTTCC TCGGCCGCAC CAATACGTTG
CCGGGCGAAG TGCGGGCGCG CAATCCGCGC TGCGCGGTGG TAGACGTGGC GGGCACCACG
CTGCATGTTC CGCACGAAGG CCGCGACGTG GAAGGCGCGG TGCACGTCTA TATCCGTCCC
GAGAAGGTGC GCCTCGCCAA TGGCGATGCA CGCATGCAAG GACGCGTGGC GAACCGCGTG
TTCATCGGCA ACCAGTGGCT GCTCGAAGTC GATACGGCGC TCGGCAAGCT GCATATCGCG
CAGCCGAATT ACGGCGCGCC GCCGCCCGAC GAAGGCCACG AAGTCGGTCT CTCGTTCACC
GACGACGACT TGCGCGTGCT GACCCGGGAG AGCGCCCATG GCAACGCTTG A
|
|---|
| Protein sequence | MTFLTLQGIS KRYGDFTAVE HLDLSVERGE FLSLLGPSGC GKTTTLQMIA GFITPSAGRI
TLGGRDITHE RPERRGMGVV FQSYALFPHM TVAGNVGFGL EMRNMKRDER AVRIAEALDL
VRLKGLDARY PKELSGGQRQ RVAIARALAM RPDLLLLDEP MSNLDAKLRE EMHIELRTIQ
KQLGITTILV THDQVEAMTM SDRIAVLHKG RIAQLSTPFD AYERPATPFA STFLGRTNTL
PGEVRARNPR CAVVDVAGTT LHVPHEGRDV EGAVHVYIRP EKVRLANGDA RMQGRVANRV
FIGNQWLLEV DTALGKLHIA QPNYGAPPPD EGHEVGLSFT DDDLRVLTRE SAHGNA
|
|---|
| |