| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_7022 |
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| Symbol | |
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| ID | 6248537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010625 |
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| Strand | - |
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| Start bp | 1682001 |
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| End bp | 1684541 |
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| Gene Length | 2541 bp |
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| Protein Length | 846 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642598672 |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_001863074 |
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| Protein GI | 186471756 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria
[COG4253] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAAAC CGTTGCAGCC CCGCACACTG AGCGTGGCGT CCGACGCGTT GCCCCTCCGC
GCTGGCGAGC CCGTGCTCAT TGCCCAGCGC GTGCATGGCA CCGAGGCACT GGGCAACCTC
TTTGATTACC GGGTGGAGCT GGCCACGCGG GACACCCCGA CCTGTCGGCT GTCGGATGCG
CAGCCGCTCG TGATCCCCGG GCAGCTGATC GGCAAGTCCC TCACCATTTC GATCGAGTTC
GAGGGTAAGG GCGTATTCGT GCCGGGCATG CCCGGCAACC TTGGGGCCGC GAATGTCGGT
GCCGGGGTGC GCCAGATTAC CGGCCTCATC ACCGCGGTTT CCAGCACGGG CAGTGACGAC
CGGCGGGCGT ATTACGAACT GACGGTTCGT CCCTGGCTCT GGATGGCCAC CCAGAACAGC
GAAAGCCGTG CTTACCAGAA CCTCAATGTG GTCGAGGTGA CCCAGGCGAT ACTCAAGGGC
GGGCAGTATC CGTGGCCCTA CGAACTGCGG CTGGGCGCAG TGGGCCTGCA AAACAACGTC
TATCCGCCGC GCGACTACGT CCGCCAGTAC TGGGAGAGTG ATTACGCGTT CCTGACCAGA
ATCTGGCGCG AATGGGGGAT TTATTACCTG TTCGATGGCA TGACGCTGGT CCTCTGCGAT
TCGCCAGGTT CCCACAAGAA GCACCACGAC GCGTACGACA CCGTAACGTA CCACGCACCC
GACGGCAAGC GCATTGATGA AGAGCATATT CACAGGCTCC GGATCTCGCA GCAGATCACG
CCGGGCGATG TGACGCTCAA CGACTACGAC TACACGCGCT CACTCGGGAA GTTCGACGTG
AACCAGTCGC AGTACAGCAA GTCGTCATTC GACAATATCG AGCAGTACCA CTGGGGCGAA
TACTCGCAGC CGCTCGCGGG CGCCATGGGG CTGTCGGGCG ATCCGAATGA CTATGACACG
GAGGGCGCGT ACCTGGCGCG CGTGCGGTTG AATGCGCTGC GTTGCCGGCG GCTGCGCATC
TATGGCACGG GCAACCTTCG CGGCCTGACC ACGGGCAAGA CGTTCCGGCT TGAAGGGCAT
CCGCAGCGAG AAGTCAACGC GGACTATCTC GTGGTGTCGA CCTCGCTCGA TGTGCGCAAT
CCGGACGAGA TCACGCGCTC AGCGGGCGAC GGTGTGCAGT ACCAGTGTGT GACCGATTTC
GTGCTGCAGC CGGCCAGTGC GTTCTTCAAG AACCGGCTGA GAAAGAAGCC GCAGGCCCAT
GCCGAAACCG CCGTGGTTGT GGGACCCGCC AACCGGCCGG TCTGGCTCGA TGGTTACGCA
CGTACCAAGG TTTCCTTTCT GTGGGACCGG CACAGCAGCC GTGACGAAAA TTCGAGCTGC
TGGGTGCGCG TGGGTTTGCC CTGGCATGGT GGGCCGCACA GCTTTATCGC GGTGCCGCGC
ATCGGCGACG AGCTGACAAT CGACTATCAC GAGGGCGACC CCGACAAGCC CTACATCTCG
GCGAGCAAGG TCAACGAGTT CAACCAGCCA CCGTTCGAGC TGCCGAAGAA TCAGGCGCTT
ACGGGGCTGG TGGGCAGCGG TCTGGACGGC AAGGGCCATA ACTACGTGGT GACCGACGAT
ACCCCCGGCC AGTTGCAGGT CCAGGTGGCG AGCGATCAGG ACTACTCGCG TCTCTCTCTC
GGCTACATCA CCCGGATCGA CTACGGCACG GGTCGGCAGC AGGCACGCGG AAGCGGATGG
GAACTGGCCA CGGACGCGTG GGGCGTGCTG CGCGCCAATC GTGGCATGCT GATTACCACA
GAGGCCCGTG GTGGTGCGCA GGCTGCAGCC AAGGACATGG GCGAGACGGT GCAGCGCCTG
ACCAAGGCCC GCGATACCCA CGAAAGTCTC GCAGAGCTTG CCCAGCAAAA CAATGCGCAG
GAGCAGGGCG CAGACCAGAG TGAAATCACG GCCGCCCTCA AGGCGCAGAA CGATGCAATT
CGCGGCGGCG CGAAAAGCGG TCCCAACGAC TTCCCGGAAT TTGCCGAAGC CCATGTCACC
ATCGCCAGTC CTTCGGGCAT TGAGACGACC ACGGCAGGCA GCACCCACAT CGCGAGCGGT
GAACACCTCG CGCTGACGGC GGGCGAACAT CTGGGTATGG CGGTCGGCAA GTCGCTGTTT
GCGACGATCC GCGAGAAGCT GAGGATCTTT GTTTACCAGT CAGGAATCCG GCTGATCGCC
GGAGCGGGAT CGATCGACAT CCAGGCGCTG TCCGACGCAG TCAATGTGCT GGCAAAACTC
AAGATTCACC AGAGCGCGAA GCGCATCGAG ATCTGGGCGG AAGAAGAGCT TTCGCTGCGC
GGAGGCAAAA GCTATCTGAC GCTCAACAAT GCCGGCATCG AAAATGGCAC GCCCGGCCAG
TGGCAGTCCT ACGCCTCGAC CCACCAGATG CCGGGGCCAA AGAGCGGCCC CGAAGACGTG
CCCGCCGCGC AGCTCAACGT CTGCGAGATG AGTGCCGCTA GCGCATCGAG CCAGCACGCC
GCCATCGTTC CCCTTGCCTG A
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| Protein sequence | MFKPLQPRTL SVASDALPLR AGEPVLIAQR VHGTEALGNL FDYRVELATR DTPTCRLSDA
QPLVIPGQLI GKSLTISIEF EGKGVFVPGM PGNLGAANVG AGVRQITGLI TAVSSTGSDD
RRAYYELTVR PWLWMATQNS ESRAYQNLNV VEVTQAILKG GQYPWPYELR LGAVGLQNNV
YPPRDYVRQY WESDYAFLTR IWREWGIYYL FDGMTLVLCD SPGSHKKHHD AYDTVTYHAP
DGKRIDEEHI HRLRISQQIT PGDVTLNDYD YTRSLGKFDV NQSQYSKSSF DNIEQYHWGE
YSQPLAGAMG LSGDPNDYDT EGAYLARVRL NALRCRRLRI YGTGNLRGLT TGKTFRLEGH
PQREVNADYL VVSTSLDVRN PDEITRSAGD GVQYQCVTDF VLQPASAFFK NRLRKKPQAH
AETAVVVGPA NRPVWLDGYA RTKVSFLWDR HSSRDENSSC WVRVGLPWHG GPHSFIAVPR
IGDELTIDYH EGDPDKPYIS ASKVNEFNQP PFELPKNQAL TGLVGSGLDG KGHNYVVTDD
TPGQLQVQVA SDQDYSRLSL GYITRIDYGT GRQQARGSGW ELATDAWGVL RANRGMLITT
EARGGAQAAA KDMGETVQRL TKARDTHESL AELAQQNNAQ EQGADQSEIT AALKAQNDAI
RGGAKSGPND FPEFAEAHVT IASPSGIETT TAGSTHIASG EHLALTAGEH LGMAVGKSLF
ATIREKLRIF VYQSGIRLIA GAGSIDIQAL SDAVNVLAKL KIHQSAKRIE IWAEEELSLR
GGKSYLTLNN AGIENGTPGQ WQSYASTHQM PGPKSGPEDV PAAQLNVCEM SAASASSQHA
AIVPLA
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