Gene Bphy_6224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_6224 
Symbol 
ID6247778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010625 
Strand
Start bp788684 
End bp790105 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content64% 
IMG OID642597913 
ProductFAD dependent oxidoreductase 
Protein accessionYP_001862315 
Protein GI186470997 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACG GTGTGATTCA TCTTGAGGGT GCGGAGTCGT CGTTCGAACG CACGGGCGGC 
AACGACACCC GCTACGACCC GACGTACGAT CCGCTCGTTT CGCCGGGCCC CGGCCAGGGC
AAGCAGTACG CTCCGACCTA CTGGGCCGCA ACCGCGGGCA CCGCGCCGCC CGACGACGGT
CCCGTCACGC AGGACATGGA CGTCGACGTG GCGATCATTG GCGGCGGCTA CACGGGGCTG
TGCACCGCGC TCTTTCTGGC GCGCGAGCAC GGCATCAAGG CCGTCGTGCT CGAGGCGAAC
CGCGTCAGCT GGGGATGTAG CAGCCGCAAC GGCGGTCAGG GGCAGAACGC GTCAGGACGT
CTGTCGCGCT CGCAATGGAT CGAGCGCTGG GGCAAGGACG TCGCCCTGAA GATGCACGAC
GAAATCGCCC AGGGCTTCGA GACGTTCAAG TCGCTGGTGG CGACGATCGA TTGCGATCCG
CAGCCGGGCG GGCACTTTCT GATCGCGCAT CGGCCGCGCA TCATGGAGAA GCTCGCTGCG
GAAGCGAAGG TATGGAAAGA CGTGTTCGGC TATCCGTCAG AGCTGATGAG CGCGGAAGCG
TTTCGCCGCG AGTACGTGAA CGATGCGGAA GCGACGGGTG CGTTGCATGA GCCCGAAGGC
ATCGGCATTC ATCCGCTAAA GCTCGCGTAT GGCTATCTGC GGCTCGCGCG CGAAGCGGGT
GCGAAGGTGC ATCCGGCGAG TCCGGTAATC GGCTGGGAAA CGATCAAGGG TGTCCATCAT
CTGCGCACGC CGGGCGGTAC CGTGCGGGCG CGCGCAGTCG GTATCGCGAC GGGCGCGTAT
ACGGCGCCGG GGCTGCATCC GTCGCTGCAT AGCAAGGTGA TGCCGATCCT GTCGAACTCG
ATGGTGACGC GTCCGCTCAC GAAATCCGAA CTTGACGCGT GCAACTTCCG CACCCACCAG
GTGCTCACCG ATACGCGCAC GTTGCGCTTC TACTACCGTT TGCTGCCTGA CAGCCGCGTG
CAGATCGGCA GCCGCAGCGC GATCACGGGA CGCGACGCGC CGAACCCCCA GCACTACGAT
CTGCTCGTTC ACGGCTTGCA GCGCAAGTTT CCGGCGCTGC AAGGCATCGA TATCGATTAC
TCGTGGTGGG GTTGGGTCGA CGTGAGCCAT GACATGATGC CGCGCGTGTT CCAGCCCGAT
CCGAAGGAAT CGGTGTTCTA CGCGCTCGGT TATGGCGGCA ATGGCGTGTC ATATTCGTCG
CAGGCAGGTC GGCGACTTGC CGAGCGCATT GCGGGCAAGG GCGCGCAACA GACACTGCCC
ATTTTTACGT CGCCGCTGCC CAGGCACATG TTCGCGCCGT TCAGACGCGT CGGTCAGCGC
ATGCTGTACC ACTGGTACTT CCTGCGCGAC GAGCAGCGTT AG
 
Protein sequence
MKHGVIHLEG AESSFERTGG NDTRYDPTYD PLVSPGPGQG KQYAPTYWAA TAGTAPPDDG 
PVTQDMDVDV AIIGGGYTGL CTALFLAREH GIKAVVLEAN RVSWGCSSRN GGQGQNASGR
LSRSQWIERW GKDVALKMHD EIAQGFETFK SLVATIDCDP QPGGHFLIAH RPRIMEKLAA
EAKVWKDVFG YPSELMSAEA FRREYVNDAE ATGALHEPEG IGIHPLKLAY GYLRLAREAG
AKVHPASPVI GWETIKGVHH LRTPGGTVRA RAVGIATGAY TAPGLHPSLH SKVMPILSNS
MVTRPLTKSE LDACNFRTHQ VLTDTRTLRF YYRLLPDSRV QIGSRSAITG RDAPNPQHYD
LLVHGLQRKF PALQGIDIDY SWWGWVDVSH DMMPRVFQPD PKESVFYALG YGGNGVSYSS
QAGRRLAERI AGKGAQQTLP IFTSPLPRHM FAPFRRVGQR MLYHWYFLRD EQR