| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_6165 |
|---|
| Symbol | |
|---|
| ID | 6247725 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010625 |
|---|
| Strand | + |
|---|
| Start bp | 718386 |
|---|
| End bp | 719087 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642597860 |
|---|
| Product | hydrolase |
|---|
| Protein accession | YP_001862262 |
|---|
| Protein GI | 186470944 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.111596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAA AAGCACTAAC GTTCGACTAC TTTGGCACGC TCGTCAATGT GGCGACGGGC
GGTATTCGCG GTATTGAAGG CGTATTGCAG CATCTTGCGC TCACGACGAC GCAAACAGCG
GCCAATGTCT ATGCGGACTG GGACAGGCGC ACGGTGCAGG GCTACAGAAG CAACGCGTAC
CGGCGCTATC GCGAGGTCGC GCAACAGGCG CTCAACGATT GTCTGGAGGC GCTACATGAA
GGCTGCACCA GGGGGCAGGA CATGGCAGCG TTGACTGAGT TGCTGCTGAC ACATCTGGTT
GAATCATCTC CGCCTTTTGA CGACGCCGTT GTGTTTCTCG ACTGGGCGCG CGACAGATTC
GTGCTCATGC CGATTACCAA CATGGACACG GATCTGTGGC GTCGAAGTCG TCTGGTTGAG
TACTTTCCGA AAGTGACGAC GGCAGAAATG GCCCGCGCTT ACAAACCATC GGAAACGATC
TTTAGAACTG GGCTTACCAC GCTTGGCATG CGAGCCGACG AAATCTTCCA TTGTTCGATC
GGCACGTGGG CCGATATCGA CGGTGCCAAG CCGCTCGGTA TCAAGGTGGC GTGGATCAAT
CGTGGTGCCG AGAAGCTGGG TGATTTCCAG GCACGCCCTG ATTACGAGTT CGCGACGCTC
GAACCTGTGC GCAGCGTGCT GGAACATCTC ATCAACGAGT GA
|
|---|
| Protein sequence | MKPKALTFDY FGTLVNVATG GIRGIEGVLQ HLALTTTQTA ANVYADWDRR TVQGYRSNAY
RRYREVAQQA LNDCLEALHE GCTRGQDMAA LTELLLTHLV ESSPPFDDAV VFLDWARDRF
VLMPITNMDT DLWRRSRLVE YFPKVTTAEM ARAYKPSETI FRTGLTTLGM RADEIFHCSI
GTWADIDGAK PLGIKVAWIN RGAEKLGDFQ ARPDYEFATL EPVRSVLEHL INE
|
|---|
| |