Gene Bphy_5388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_5388 
Symbol 
ID6246873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp2530959 
End bp2532026 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content69% 
IMG OID642597109 
ProductLacI family transcription regulator 
Protein accessionYP_001861512 
Protein GI186474170 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCG CCAAGCCAAC CGACGACGCG CCGATCGATC TCAAGGACAG CGCCACCCCC 
GCGCGTCGCA CGCGCGGCGG GCCGAAGGGC TTGCGCATCA CGGACGTCGC GGCGCAAGCA
GGCGTCTCGC CCATCACGGT GTCGCGCGTG TTCAACAGCC CGGCGTCCGT CGCGCCCGAA
ACACTCGAGC GCGTGCGCCA GGTCGTGCAG AAACTTGGCT ATGTGCCGAA CCGACTCGCA
GGCGGGTTGT CGTCGGCGCG CTCGCGGCTG ATCGCAGCCA TCGTGCCCAC CATCGCGCAC
TCGCTGTTCT CCGAGACCAT TCAGGTGTTC AGCGAGACCA TGTCGCGCGC GGGCTATGAA
GTGCTGCTCG CACTGAGCGG CTACAGCGAC AGCAACGAAG AAAACCTGCT CGATACCGTG
CTGAGCCGCC GGCCCGAGGG CGTGCTGCTG ACGGGCGTCG CGCATACGGA TTCATTGCGC
GAGCGTCTGC GCAACGTGGG CATTCCCGTC GTCGAAACGT GGGACATGAC GCAGACGCCC
ATCGACATGC TGGTCGGCTT CTCGCATGAG CAGATCGGCG CGGCGGTGGC GGAGCGCTTC
CTCGCGCGCG GCGCGAAACG GCCCGCGTTG ATTTCGGCGA GCGACGTACG CGCGCTCGCG
CGCCGCGCCG GCTTTCGCGA GCGGCTCGCG AAGGCGGGCA TGAGGGACGT GGCGGAAGTG
ATCGTCGCGC CGCCCAGTTC GCTGGCGACG GGCAAGGCCG CGTTGCCGCG ATTGCTGGAC
AGCGCGCCGG AGGTCGATGC CGTGTTTTGC GGCTCGGACC TGCTGGCGAT CGGCGCGCTC
GGCGCGGCAC GGCGCATGGG CATCGATGTG CCTGCGCGGC TTGCGATCTG CGGTTTCGGC
GACCTGGACT TCGCGACGGA AACGACACCG CAACTGACGA CGGTTCGCGT CGACGGCACA
CGCATCGGCG TGAGCGCGGC GCGCGCGCTG CTCGACCGGC TGAACGGGAT TCACGAGCGT
GCGTTCGTCG ATGTCGGGTT CAGCGTGGTG GGGCGCGAAT CGGCGTGA
 
Protein sequence
MPTAKPTDDA PIDLKDSATP ARRTRGGPKG LRITDVAAQA GVSPITVSRV FNSPASVAPE 
TLERVRQVVQ KLGYVPNRLA GGLSSARSRL IAAIVPTIAH SLFSETIQVF SETMSRAGYE
VLLALSGYSD SNEENLLDTV LSRRPEGVLL TGVAHTDSLR ERLRNVGIPV VETWDMTQTP
IDMLVGFSHE QIGAAVAERF LARGAKRPAL ISASDVRALA RRAGFRERLA KAGMRDVAEV
IVAPPSSLAT GKAALPRLLD SAPEVDAVFC GSDLLAIGAL GAARRMGIDV PARLAICGFG
DLDFATETTP QLTTVRVDGT RIGVSAARAL LDRLNGIHER AFVDVGFSVV GRESA