| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_5019 |
|---|
| Symbol | |
|---|
| ID | 6246516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 2115416 |
|---|
| End bp | 2116054 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642596748 |
|---|
| Product | putative transmembrane hydrogenase cytochrome b-type subunit |
|---|
| Protein accession | YP_001861155 |
|---|
| Protein GI | 186473813 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.211466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGA TAAAAGCGAC ACTCACGCCA GCGCACGACA GCGTTCCGCG CCACTCGCCC
ATTCATCCGC TATGGTTGCG CATCACGCAT TGGCTCAATG CGTTTGCCGC GCTGATCATG
ATGTTCTCGG GCTGGCGCAT CTACGACGCG TCGCCTGTTT TCCGCGGCAT TGTGATTCCC
CCGTCGATCA CGCTTGGCGG CTGGCTCGGC GGGGCGCTGC AGTGGCACTT CGCGGCGATG
TGGCTGCTGG TCTTCAACGG CATCGTGTAT CTCGCGCTCA ACATCGCAAG CGGGCGCTTC
GTCGCAAAGT TCTTTCCGCT TTCACCGCGT GCCGTGCTTC ACGACTTCAT CGCCGCCGTG
AGCGGCAAGC TGTCTCACGC GGACTTGCGT CAGTACAACG CGGTGCAGAA GCTCGCCTAT
CTCGCCATCA TCGTCGATCT CGCGGTGCTC GTGCTGTCGG GGCTCGCGAT CTGGAAGTCG
GTGCAGTTTC CGCTGTTGCG CGAACTGATG GGCGGTTACG ACAACGCGCG CATCGTTCAC
TTCTGCGCGA TGGCGGTGAT GGCGGCGTTC GTCGTCGTGC ACATCGCGAT GGTCGCGCTC
GTGCCGCGTT CGCTGCTGAC CATGCTGCGC GGCCGTTGA
|
|---|
| Protein sequence | MDTIKATLTP AHDSVPRHSP IHPLWLRITH WLNAFAALIM MFSGWRIYDA SPVFRGIVIP
PSITLGGWLG GALQWHFAAM WLLVFNGIVY LALNIASGRF VAKFFPLSPR AVLHDFIAAV
SGKLSHADLR QYNAVQKLAY LAIIVDLAVL VLSGLAIWKS VQFPLLRELM GGYDNARIVH
FCAMAVMAAF VVVHIAMVAL VPRSLLTMLR GR
|
|---|
| |