| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4496 |
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| Symbol | |
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| ID | 6246016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1541501 |
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| End bp | 1542955 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642596248 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001860655 |
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| Protein GI | 186473313 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.129506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.194485 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA ACGTAGCCAG AGCGCTCGCC GTTGCCGCCG CCATGACGCT TGCGGCCTGT
GCCGTGCAGC CCGGGACGCA CGCGGACTTG CCGCAGACGG TGAAGACCGT CGCGCCCGAC
GCGTGGAGCG TCGACGCGCC GAACGACACG GTGGACGCCG ACCAGTGGTG GTCGCAGTTC
GGCGACCCGA CGATGCACAA ACTCGTCGAC CTCGTGCTCA ACGACAACCT CGACGTCAAG
GCGGCCGTCG AACGCGTGAA GCAGGCCGGG GAGGTGACGA AGCAGCAGCG CGCCGCGTTG
TCGCCGCAAC TCGATGCAGG CGCGACGGCT GCGTATGAGC GGCAAAATAC GCCGCCGCCG
CTCGGCTATG TGAAGCAGGC GGGGGCAGGT CTGACGGCCT CGTGGCAGCC CGATGTGTTC
GGCGGCGAAC GTCTCGCCGT GCTCGCCGCG CAGGCACAGG CGACGGGCCG TCAATGGGCG
CTGAACGAAT TGCGGCTCGC GCTCGCCGCG AATACAGCCG CTGCATATAT CGATTTGCGC
TGGGCGCAGA CGCAACGGCA GATCATCAAC GAGAACGAGG ACATTCGCAG CCGCGCGCTG
AAGCTTACGC AGCAGCGCCT GAAATACGGG CTCTCGACGC AGCTCGATGT CGCGCGTGCG
CAAAACCAGC TGCAGGACTT GCAGGCGCAG ATTCCGAAGA TCAACTCGAC CATCCAGCAC
GACATGAGCC TGATCGCAGT GTACTCGGGA CGTACGCCGG AAAGCGTCGA CAGCCTGCTG
CTCAGCGACG CGCAGCCGAT TCCCGTACCG TCGCAAAGCG TGCCCCTGAC GCTGCCTTCC
GAAGCGCTGC TGCGCCGCCC CGATGTGCGC ACCGCCTACG CGACTGTCGA ACAGCGCGCC
GCCGAAGTGG GCGTCGCGCG AGCGGACCGC TATCCGAAGT TCAGCCTGCG CCTGAGCGAC
GGCATTCTCG CGTCGTCGTA TCTCGGCATG CCGACATTGA CGGACAACCT GTTCAGCGCA
GCATTGAACG CTACCGCGCC GATCTTCAAT GCAGGCCGCA TCACCGCGCA TATCGAGGAG
AACGAGAGCC GCATGCGCGA ATCGCAATTG AACCTGCAGC AGACGATGCT GAATGCGCTG
AAGGATATCG AGGACACGCG CAGCGATCTC GTCAACGGCG ACGCACAGGT CGCGAAGCTT
GCTGGTGCGC TCGATGCATC GGGGCATGCG TTGCGTCTGT CGACGGAGCT GTACAAGGGC
GGCGCGTCGA GCTTCCTCGA TGTGCTCGAT GCGCAGGAAG CGTATCTGCG CGATTCGGAA
TCGTTGAATC AGGCGAAGCG TGAGCATGCG CAAGCTGCTG TTGCGTTGTA TCGCTCGCTC
GGCGGCGGCT GGGATGCGCC CGCCGCCAGT GACGCAGCGA AGGCCAGGCC GACGACCGAT
GTCGCCGCGA ACTGA
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| Protein sequence | MKSNVARALA VAAAMTLAAC AVQPGTHADL PQTVKTVAPD AWSVDAPNDT VDADQWWSQF
GDPTMHKLVD LVLNDNLDVK AAVERVKQAG EVTKQQRAAL SPQLDAGATA AYERQNTPPP
LGYVKQAGAG LTASWQPDVF GGERLAVLAA QAQATGRQWA LNELRLALAA NTAAAYIDLR
WAQTQRQIIN ENEDIRSRAL KLTQQRLKYG LSTQLDVARA QNQLQDLQAQ IPKINSTIQH
DMSLIAVYSG RTPESVDSLL LSDAQPIPVP SQSVPLTLPS EALLRRPDVR TAYATVEQRA
AEVGVARADR YPKFSLRLSD GILASSYLGM PTLTDNLFSA ALNATAPIFN AGRITAHIEE
NESRMRESQL NLQQTMLNAL KDIEDTRSDL VNGDAQVAKL AGALDASGHA LRLSTELYKG
GASSFLDVLD AQEAYLRDSE SLNQAKREHA QAAVALYRSL GGGWDAPAAS DAAKARPTTD
VAAN
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